Rosistilla ulvae: EC9_41950
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Entry
EC9_41950 CDS
T09881
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ruv
Rosistilla ulvae
Pathway
ruv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ruv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EC9_41950 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ruv03021
]
EC9_41950 (rpoC)
03400 DNA repair and recombination proteins [BR:
ruv03400
]
EC9_41950 (rpoC)
Enzymes [BR:
ruv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EC9_41950 (rpoC)
Transcription machinery [BR:
ruv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EC9_41950 (rpoC)
DNA repair and recombination proteins [BR:
ruv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EC9_41950 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QDS89992
UniProt:
A0A517M540
LinkDB
All DBs
Position
5665695..5670035
Genome browser
AA seq
1446 aa
AA seq
DB search
MSNGESTTYDRINDYASVKINLARPQDIRGWSFGEVKKPETINYRTYRPEKDGLFCERIF
GPEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPIVHIWFFKAMPS
RLGNLLSMKTTSLEKVIYFQDYVVVDPGQTDLELQQMLTEEEYRAAKAQWGDNAFEADMG
AEAVRKLLGKLDLVALSEKLRVDLEETGSKQKAKDLINRLKIVESIRDSDNRPEWMVLDV
IPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLRKLVDLNAPEVIIRNEKRMLQQ
SVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPRL
KLHQCGLPKKIALELYQPFIIRKLKELGHADTIKSAKKMLERKDEEVWDILETVIRNHPV
MLNRAPTLHRMGIQAFEPTLVEGNAINLHPLVCKGFNADFDGDQMAVHLPLSIEAQVEAH
TLMLSTNNIFAPSNGKPIMSPSQDMVMGCYFITVELPDQKGEGMTFSCAEEAEMAYREGV
IALHAKIRVRLPKYRKIKTPDDSAKGGQIIDTTYGRIMFNEMLPLGMDYYNQAMRSGDLA
SAISDTYQRLGRKATIQVLDDMMQLGFRESTRSGLSFATDDLVTPDSKVKFIAEAEKEVM
KQRKNYDRGLITGDERYKKVLDTWTGAREKITTDMMHAMEHDFRPGGWYVNPVYLMAHSG
ARGGIEQIRQLGGMRGLMAKPSGEIIETPIKANFREGLTVLEYFSSTHGARKGLADTALK
TADSGYLTRKLADVAQNVVITMEDCGTTQGITKNVIYRGEKVEVRLADSINGRVSRQNIV
DPITDEVIVRESEMITPEIARKVEEMGLEKIQVRSPMTCDAPLGICRRCYGMDMATGSLV
EEGMAVGIIAAQSIGEPGTQLTMRTFHIGGSVDVAMEDSDIRAQKGGFVRLTRLRAVINE
EGQLVALTRNGEIAVVDDRGREIEKHEVPTGATLPVKDGEEVKAGAILCEWNPHSVPILA
EVDGKVRFDDIVEGETMKLEREASGNMRMTIMEHKGELHPQIVIEDATGATLNVQYLPER
AVIKIKEGTQIKTGSALAEMPRESGGVSDITGGLPRITEIFEARKPKEPAVIAEVDGTVE
ILAEKKRGKRTIVVRSESGIEREHLVPHGKRFLVHTGDIVRAGQALIDGPLVPHDILRVS
GEEAVQQYLLHEVQQVYRSQRVEINDKHVEIIIARMLRKVKIESSGNTSILPGLVMDRFE
FRRANQSMAKCVKISDKGDSDFAESSIIPKETFEQTNAEIEALGGSPARGKKPRGATAST
QLLGITKASVQSSSFISAASFQETTKVLTEAALAGKVDRLVGLKENVILGHLIPAGTGFR
IFQDSEVSYRREAMEELAGTAPQQLEESFPLLADGAPPADDSGSQATPPASVQTLDSLLG
GGKTDE
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgaaagcaccacttacgaccgcatcaatgattacgcctcggtcaagatc
aacctggcccgcccgcaagacatccgcggctggtcgtttggtgaggtcaagaagccagag
acgatcaactaccgtacctaccgtcccgagaaggatggtctgttttgcgagcggatcttt
ggccctgaaaaggactgggagtgcgcatgcggtaaataccgcggcatgaaatacaaggga
atgatctgcgatcgctgcggtgtgaaagtcacgcacagccgcgttcgtcgtaagcggatg
ggccacatcgaattggctgcgccgatcgttcacatctggttcttcaaagcgatgcctagc
cgcttgggcaacctcttgagcatgaagacgaccagcctggaaaaggtgatctacttccag
gactacgtcgttgtcgatccaggtcaaaccgacctcgaactgcaacagatgctgaccgaa
gaagagtaccgcgccgccaaggctcagtggggcgacaacgccttcgaagccgacatgggc
gccgaagctgtccgcaagctgttgggcaaactcgacctggtcgcgctgtcggaaaaactg
cgcgtcgatctggaagagaccggcagcaagcagaaagccaaagacctgatcaaccgcttg
aagatcgtcgaatcgatccgcgacagcgacaaccgtcccgaatggatggtcctggacgtg
atccccgtgatcccgcccgacctgcgtcctctggttctgctggacagcggcaacttcgcg
accagcgacctgaacgacctctatcgccggatcatcaaccgcaacaaccggttgcgtaag
ttggtcgatctgaacgcgcctgaagtgatcattcgcaacgaaaagcggatgttgcaacaa
tcggtcgacgcactgttcgacaacaaccgttgcaagcgtccggtactgggcagcagcaat
cgtccgctgaaatccttgaccgacatgatcaagggtaaacaggggcgtttccgtgaaaac
ctgctgggtaaacgtgtcgattattccgctcgttcggtaatcgtcgtcggtcctcgtctg
aagctgcaccaatgcggacttcccaagaagatcgcgttggaactgtaccaaccgttcatc
attcgcaagctgaaagagctgggtcacgccgacacgatcaaatcggcgaagaagatgctc
gagcgaaaagacgaagaggtttgggatatcctggaaaccgtcatccgcaaccacccggtg
atgttgaaccgggctcctacgttgcaccggatgggtatccaggcgttcgaaccaaccttg
gtcgaaggtaacgcgatcaacctgcacccgctggtttgcaaaggcttcaacgccgacttc
gacggcgatcagatggcggtccacttgccgctttcgatcgaggcacaagtcgaagcgcac
acgttgatgttgagcacaaacaacattttcgcgccgtccaatggtaagccgatcatgagt
ccgtcgcaggacatggtcatgggttgctacttcatcacggtcgagctgcccgatcaaaag
ggcgaaggcatgaccttcagctgtgctgaagaagccgagatggcttatcgcgaaggcgtc
atcgcgctgcacgcgaagattcgcgtccggttgccgaagtaccgcaagatcaagacgccc
gacgattcggccaagggcggtcagatcatcgacacaacctacggacgcatcatgttcaat
gagatgctgccgctgggtatggattattacaaccaagcgatgcgttcgggcgatctcgcc
tcggcgattagcgatacctaccaacgtctgggtcgtaaagcgacgatccaagtgttggac
gacatgatgcagttgggcttccgcgaatcgactcgcagcggtttgtcgtttgcgaccgat
gatctggtaactcccgattcaaaggtcaagttcatcgccgaagctgaaaaagaggtgatg
aagcaacgcaagaactacgatcgcggtttgatcaccggcgacgagcggtacaagaaggta
cttgatacctggaccggtgctcgtgaaaagatcacgaccgacatgatgcacgcgatggaa
cacgatttccgtcccggcggttggtatgtgaaccctgtatatctgatggcccactccggt
gctcgtggtggtattgaacagattcgtcagctgggcggtatgcgtggtctgatggcgaag
ccgtcgggtgagatcatcgaaacgccgattaaggcgaacttccgtgaaggtctgacggta
ctggaatacttcagttcgacgcacggtgctcgtaagggtctggccgatacggcgttgaag
acagctgactcgggttacctgacacgtaagctggccgacgtcgcccaaaacgtggtcatc
acgatggaagactgcggcacgacccaaggtatcaccaaaaacgtgatttaccgtggtgaa
aaggtcgaggtacgcttggccgacagcatcaacggtcgcgtcagtcgccaaaacatcgtc
gatccgatcaccgacgaagtaatcgtccgtgaaagcgaaatgatcacgccagagatcgct
cgcaaggtcgaagagatgggcttggaaaagatccaagttcgcagcccgatgacctgcgat
gcaccgttgggtatctgtcgccgttgttacggcatggatatggcgaccggatcgttggtc
gaagaaggcatggccgtcggtatcatcgctgctcaatcgattggtgaacctggtacacag
ctgacgatgcgtacgttccacatcggtggttcggtcgacgtcgcgatggaagatagcgac
atccgcgctcagaagggtggattcgttcgcttgactcgcttgcgtgcggttatcaacgaa
gagggccagttggtcgcgttgacccgtaacggtgaaatcgcggttgtcgatgatcgcggt
cgcgagatcgaaaagcacgaagtaccaaccggtgcaacgctgcctgtaaaggatggcgaa
gaggtcaaagccggtgcgatcctttgcgaatggaacccgcacagcgtgccgattctcgcc
gaggtcgacggtaaggttcgcttcgacgatatcgtcgagggcgaaacgatgaagctggaa
cgtgaagccagcggtaacatgcgtatgacgatcatggaacacaagggtgaacttcacccg
cagatcgtgatcgaagacgccaccggcgcgacgctgaacgttcaatatctgcccgaacgt
gctgtgatcaagattaaggaaggcactcagatcaaaaccggttcggctctggcggaaatg
ccacgtgagtcgggcggtgtatcggacatcaccggtggtctgcctcgtattaccgagatc
ttcgaagctcgtaaaccgaaggaacccgcggttatcgccgaggtcgacggtaccgtcgaa
atcctggctgagaagaaacgcggtaagcgaacgatcgttgtccgcagcgaaagcggtatc
gaacgcgagcacttggtgcctcacggtaagcgattcttggtccacaccggcgacatcgtc
cgcgctggtcaggccctgatcgacggtccgttggttccgcacgatatccttcgcgtctcg
ggtgaagaagcggttcaacagtacctgctgcacgaagtccaacaggtctatcgttcgcag
cgtgtggagatcaacgataagcacgtcgagatcatcatcgcacggatgttgcgtaaggtg
aaaatcgaatcgtccggtaacaccagcatcctgcctggcttggtaatggaccgcttcgaa
ttccgtcgcgctaaccaatcgatggccaagtgcgtcaagatcagcgataagggcgacagc
gatttcgccgaatcgtcgatcattccgaaggaaacgttcgaacagaccaacgcggaaatc
gaagctctgggcggttcgccggcccgaggcaagaagccgcgtggtgcaaccgcgagtact
cagttgttgggtatcacgaaggcatcggtccaatcgagtagctttatctcggcggcgtcg
ttccaagaaacgaccaaggttctgaccgaagcggctttggccggcaaggtcgaccgcttg
gttggtttgaaggaaaacgtgatcctgggtcacttgatccccgctggtaccggtttccgc
atcttccaagattcggaggtcagttaccgccgcgaagcgatggaagaactggccggaacc
gcaccgcaacaattggaagagagcttcccattgttggccgatggagctccgcccgccgac
gacagcggatcccaagcgactccgccagcgagcgtccaaaccttggacagcctgttgggc
ggcggcaaaacggacgaatag
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integrated database retrieval system
