Ruegeria sp. YS9: NOR97_01805
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Entry
NOR97_01805 CDS
T10219
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ruy Ruegeria sp. YS9
Pathway
ruy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NOR97_01805 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruy03400
]
NOR97_01805 (uvrB)
DNA repair and recombination proteins [BR:
ruy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOR97_01805 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NOR97_01805 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Kinesin
LIN13_N
eIF3_p135
AAA
DUF8847
Ish1
Motif
Other DBs
NCBI-ProteinID:
UUV07733
LinkDB
All DBs
Position
1:complement(340302..342458)
Genome browser
AA seq
718 aa
AA seq
DB search
MTTEDVRARLKLEGGKRFVMHTEFAPAGDQPTAIKELAGGILDGERDQVLLGATGTGKTF
TMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYDYYQPEAYVARSDT
YIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDLKVGNEY
DQRQVMADLVAQQYRRNDQAFQRGSFRVRGDSLEIWPAHLEDRAWKFSFFGEELESITEF
DPLTGERAATMEQVRVYANSHYVTPKPTMQQAIIGIKKELRIRLDQLVGEGKLLEAQRLE
QRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQI
GGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAKWEIEQTGGV
FTEQVIRPTGLLDPEVEIRPVSMQVDDLLDEVRKVAANGFRTLVTTLTKRMAEDLTEYLH
EQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEG
FLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALEETNRRRAKQIAYNEEHGITPE
TVKKNVEDVLAGLYQGDVDMNRVTATIDKPMHGANLEAHLDGLRDKMRKAAENLEFEEAA
NIRDEIKRLEAVDLAIADDPMARQWAVEKASEDAVKSRGRSTAGRPGQRGGNVKRRKR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgaagatgttcgggcccgcctgaaactggaaggcggcaaacggtttgtcatg
catacggagttcgcccccgcaggagaccagccaaccgcgatcaaggaacttgcgggcggt
attctggatggcgagcgcgatcaggttctgttgggggcgaccggtacgggcaaaaccttc
acgatggccaaggtgatcgaggaaacccagcgcccggccatcatccttgcccccaacaag
acattggcggcgcagctatatggcgagttcaaaggcttcttcccggaaaacgcggtcgaa
tacttcgtctcctactacgactactaccagcccgaggcctatgtcgcgcggtcggacacg
tatatcgagaaggaatcgcagatcaacgaacagatcgaccggatgcgccactcggccacg
cgggcgctgctggaacgggatgacgtgatcatcgtggcctcggtctcgtgcatctacggt
atcggctcggtcgagacctacggggcgatgacgcaggatctgaaggtcgggaacgaatac
gaccagcggcaggtgatggccgatctggtggcccagcaataccgccgcaacgatcaggcc
ttccagcgcggcagcttccgggtacggggcgattccctggaaatctggcccgcccacctt
gaggatcgcgcctggaaattctcgttcttcggtgaggaactggaaagcatcaccgaattc
gacccgctgaccggcgagcgcgccgcaacgatggaacaggtgcgcgtctatgcgaactcg
cactacgtcacgccgaaaccgacgatgcagcaggcgatcatcggcatcaaaaaggaattg
cgcatccggctcgaccagctggtcggtgagggcaagttgctggaggcccaacggctggag
cagcgcaccaatttcgatctggaaatgctcgaggccaccggcgtctgcaacgggatcgag
aactactcgcgctatctgaccggccgcgcgcccggagagccgcccccgaccctgttcgaa
ttcatccccgacaacgccatcgtttttgccgacgaaagccacgtctccgtcccgcagatc
ggcggcatgtatcggggcgactatcggcgcaagttcaccctggccgaacacggcttccgc
ctgccgtcctgcatggacaaccgacctttgaagttcgaggaatgggacgccatgcgcccg
caatccgtcttcgtcagcgctaccccggccaagtgggaaatcgaacagaccggcggtgtc
ttcaccgaacaggtgatccgccccacgggcctcttggaccctgaggtcgagatccgccct
gtatccatgcaggtggacgatttgctggacgaggtgcgcaaggtcgccgccaatggcttc
cgcacgctggtcaccacgctgaccaaacgcatggccgaggacctgaccgaatacctgcac
gaacagggcataaaagtccgctacatgcattccgacatcgacacgctggaacgcatcgag
atcctgcgcgacctgcggctgggcgcattcgacgtgctggtgggcatcaacctgctgcgc
gaggggctcgacatccccgaatgcgggctggtcgccattctggacgccgacaaggaaggc
ttcctacggtccgaaacctcgctgatccagaccatcggccgcgccgcccgcaacgccgag
ggccgcgtgatcatgtatgccgaccgcatcaccggcagcatggagcgtgcgctggaggaa
accaaccgccgccgcgccaagcagatcgcctataacgaagaacacggcatcacgcccgag
acggtgaagaagaatgtcgaggacgttctggccgggctctatcagggcgacgtggacatg
aaccgcgtcaccgccaccatcgacaaaccgatgcacggcgcgaatttggaggcccatctg
gacggtctgcgcgacaagatgcgcaaggcggccgagaacctggaattcgaagaggccgcc
aatatccgggatgagatcaaacgcttggaagcggtcgatcttgccatcgccgacgacccc
atggcgcgccaatgggcggtcgagaaagcctcggaagatgcagtgaaatcgcgcggacgg
tcgacggctggcaggccggggcagcgtggggggaatgtgaagcggaggaagcggtag
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integrated database retrieval system
