Ruegeria sp. YS9: NOR97_03335
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Entry
NOR97_03335 CDS
T10219
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NOR97_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruy03400
]
NOR97_03335
Enzymes [BR:
ruy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOR97_03335
DNA repair and recombination proteins [BR:
ruy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NOR97_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
MarR_2
AAA_30
HTH_IclR
zf-CHY
MarR
MerR_1
Motif
Other DBs
NCBI-ProteinID:
UUV06803
LinkDB
All DBs
Position
1:638565..640760
Genome browser
AA seq
731 aa
AA seq
DB search
MSANGFFDQGELVAVLTTQPLDRTLDYKAPEGGCVLGAFVEVPLGPRKVLGVVWGPGQGG
FDLSKARSVIRVLEVAPMREEMRVFLEKVADYTLTPMPAMLRLATRAPGLGDPPSMRKVY
RLGDTEPDRMTDARTRVLEVLRDYGGLAFTLKELAEQAGVTSSVVKGLVKQGAVREEDSP
RDLPYPHLDPDLPGKDLTADQAAAVKRLQAGQRTGDYGTTLLKGVTGSGKTEVYLEAVAE
ALRMGRQALVLLPEIALTAEFLTRVEARFGARPAEWHSGATMTERRRVWRMVGQGNAQLV
VGARSALFLPFRDLGLVVVDEEHDTSYKQEDGVHYSARDMAVLRSAICGARVILASATPS
LESWANAEAGKYERLDLTSRFGAAVLPEMKPIDMRAEQMTPGTWVSPSLRQAVQQRIEKG
EQSLLFINRRGYAPVTLCRACGEQIACDHCDARMVEHRFLKRLMCHQCGETKPMPEACPS
CGVEGKLAPVGPGIERLAEEAEATFPEANIAMLSSDLFGSARALKAKIEEIAAGDADIII
GTQLVAKGHNFPKLTLVGVIDADLSLHGADLRAAERTFQLMRQVAGRAGRADKPGQALLQ
TFQPEHPVIRAILSGDEEGFWKAEAAGRQAAGVPPYGRMAGIVLSGPEVGPVFDIGNAMA
RNDTPLTQIGAQVFGPAPAPIARIRGRHRVRLLVKAPKGAPIQDAIARWIAPLRLKGDIR
LTVDIDPQNFY
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctaacggatttttcgaccaaggagagctggttgcggtgctgacaacgcagccg
cttgaccggacgctggattacaaagcgcccgaaggcgggtgcgttctgggcgcgtttgtc
gaggttcctttgggcccgcgcaaggtgctgggggtggtctgggggccggggcagggtggt
tttgatctgagcaaggcgcggtcggtgatccgggttctcgaagttgctccgatgcgcgaa
gagatgcgggtgtttctggagaaggttgccgattacactctgacgccaatgcctgcgatg
ctgcgtctggcgacgcgggcaccgggcctgggtgatccgccgtctatgcgcaaggtctac
cggctgggtgatactgaacctgaccgaatgaccgatgcccggacccgggttctggaggta
ttgcgggattatggcgggctggcctttaccttgaaggaactcgccgaacaggcaggtgta
acgtcatctgttgtcaaggggttggtcaaacaaggcgccgtgcgcgaagaggacagcccg
cgcgacctgccttatccgcatcttgatccggacctgcccgggaaagacctgaccgcggat
caggcagcggcggtcaaacggcttcaggccgggcagcggacaggcgattacggcaccacg
ctgctgaaaggcgttaccggttccggcaagaccgaggtctatttggaggccgtggccgag
gcgttgcgcatggggcggcaggccttggttctgcttcccgagattgccctgaccgcagaa
tttctgacccgggtcgaggcgcggttcggtgcgcgcccggcggaatggcattccggcgcg
acgatgacggaacggcgccgggtctggcggatggtcggacaggggaatgcgcaactggtc
gtgggcgcccggtcggcgctgtttctgccattccgcgatctggggcttgtggtggtcgat
gaagaacacgacacgtcctacaaacaggaagacggcgtgcactacagcgcccgcgacatg
gcagttctgcgctcggcgatctgtggcgcccgggtgattctggccagcgcgacgccttcg
ctggaaagctgggccaatgccgaggccggcaaatatgaacggctcgacctgacctcgcgc
tttggagcggcggtattgcccgagatgaagcccatcgacatgcgggccgaacagatgact
cccggaacgtgggtttctccgtctttgcggcaagcggtgcagcagcggatcgaaaaaggc
gaacaatcgctattgttcatcaaccgccgtggctatgcgccggtcacgttgtgccgggcc
tgcggtgagcagatcgcctgtgatcattgcgacgcacgcatggtcgagcatcggtttctc
aagcggctgatgtgccaccaatgcggtgaaaccaagccgatgcccgaagcctgcccctct
tgcggcgtggaaggcaagctggccccggtcgggccggggatcgaacggctggcggaagaa
gccgaggcgaccttcccagaggcaaacatcgcgatgctgagctctgatctgttcggttcg
gcgcgggccttgaaggccaagattgaagagatcgccgccggggatgccgatattatcatc
ggtacgcagctggtggccaagggccacaactttcccaaactcacattggtcggtgtgatc
gacgctgacctttccctgcatggcgcggacctgcgcgcggctgagcgtacgtttcaattg
atgcggcaagtggccgggcgcgcgggacgggcggacaagccggggcaggcgttgttgcag
acatttcaaccggaacacccggtgatccgggccatcctgtcgggtgacgaggaagggttc
tggaaagccgaggcagcgggtcggcaggcggcaggcgtgccgccctatggtcgcatggcc
gggatcgtgttgtcgggccccgaggtcgggccggttttcgatatcggcaatgcaatggca
cgcaacgatacacctttgacgcagatcggtgctcaggtctttggcccggcgccggcaccc
attgcacgtatacgtggccgccacagagtacgcttattggtgaaagccccgaaaggggcg
ccgattcaggatgccattgcccgctggatcgccccattgcgtctgaagggtgatatccgt
ctgaccgtcgatattgacccacagaatttttattga
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