Ruegeria sp. YS9: NOR97_04260
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Entry
NOR97_04260 CDS
T10219
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy00071
Fatty acid degradation
ruy00280
Valine, leucine and isoleucine degradation
ruy00310
Lysine degradation
ruy00362
Benzoate degradation
ruy00380
Tryptophan metabolism
ruy00410
beta-Alanine metabolism
ruy00640
Propanoate metabolism
ruy00650
Butanoate metabolism
ruy00907
Pinene, camphor and geraniol degradation
ruy00930
Caprolactam degradation
ruy01100
Metabolic pathways
ruy01110
Biosynthesis of secondary metabolites
ruy01120
Microbial metabolism in diverse environments
ruy01200
Carbon metabolism
ruy01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NOR97_04260
00650 Butanoate metabolism
NOR97_04260
09103 Lipid metabolism
00071 Fatty acid degradation
NOR97_04260
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NOR97_04260
00310 Lysine degradation
NOR97_04260
00380 Tryptophan metabolism
NOR97_04260
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NOR97_04260
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NOR97_04260
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NOR97_04260
00930 Caprolactam degradation
NOR97_04260
Enzymes [BR:
ruy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NOR97_04260
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NOR97_04260
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NOR97_04260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
F420_oxidored
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
2-Hacid_dh_C
Pyr_redox_2
ApbA
NAD_binding_8
AlaDh_PNT_C
RS_preATP-grasp-like
FAD_binding_3
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
UUV06979
LinkDB
All DBs
Position
1:complement(820993..823194)
Genome browser
AA seq
733 aa
AA seq
DB search
MTDFTLTKDADGVAFVTWDAQGKSMNVLTREAFQEVSQLIDQALSDDEIKGIVITSGKEG
SFAGGMDLNTLATIRQEAGDEPAQALFDFVMGGHHILRKLELAGMDPKTKKGGKPIACAI
NGTCAGIGTEIALACHHRVMTSNPKSKIGLPEILLGIFPGGGGTIRYSRMVGAMAAAPVL
LEGKMMDPAKAKGAQLIDAVADDPVAAAKEWVLNAKDADLVKPWDAKGYKMPGGAPYHPA
GFMTFVGASAMVHGKTQGAFPAAKALLSAIYEGALVDFDTALKIEARWFTNVLMNPSSSA
MIRTLFLNKEALEKGAVRPKGVPDQRVKKIGVLGAGMMGAGIALVSAQAGMEVVLIDRDQ
EAADKGKAYTETYLDKGIKRGKVTAEKKEAMLARITATPDLDHLKGCDLIIEAVFEDMGV
KAEMTKKVEAIIPEDCIFASNTSTLPISDLAKASVRPDQFIGIHFFSPVEKMLLVEIIKG
KETGDRAVAKALDYVRQIRKTPIVVNDARFFYANRCIIPYINEGARMITEGVSPVLIDNA
ARQLGFPVGPIQLTDETSIDLGAKIARATKAAMGDAYPESPSDDLIFWMEEQGRLGRKAN
AGFFVYDEKGKRVEYWKGLQEKYPLAKDQPDLIEVQERLMFAQVLEAVRALEEGVLEDIR
EGDVGAILGWGFAPWSGGPLSWLDIIGTPYAAERCDQLAEKYGERFACPPLLREMAEKGQ
TFYGRFNPEAKAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttcactctgaccaaagacgcggacggcgtcgctttcgttacctgggacgcc
caggggaaatccatgaacgtgctgacccgcgaagcttttcaggaagtcagccaactgatt
gatcaggccctgagcgacgacgagatcaaaggtattgtcatcacctcgggcaaggaaggc
tcttttgccggtggcatggacctgaacacactggcgactatccgtcaggaagcgggtgac
gaacccgcacaggcgttgtttgatttcgtcatgggcgggcatcacatcctgcgcaagctg
gaattggcgggcatggaccccaagaccaagaaaggcggcaaacccatcgcctgcgcgatc
aacggaacctgcgccgggatcgggaccgagatcgcactggcgtgtcatcaccgtgttatg
accagcaatccaaagtccaagatcggtctgcccgaaatcctgttgggcatcttccccggc
ggcggcggcaccatccgttacagccgcatggttggtgcaatggcggcggcccccgtactg
cttgaaggcaagatgatggacccggccaaggccaagggcgcgcagttgatcgacgcggtt
gccgacgatccggttgccgcggccaaggaatgggttctgaatgccaaggacgctgatctg
gtgaaaccctgggacgcgaagggctacaagatgcccggtggcgcgccttaccaccctgcc
ggtttcatgaccttcgtgggcgcgagcgccatggttcacggaaaaactcaaggtgcgttt
cctgcggccaaagcccttctgagcgcgatctatgagggcgcgttggttgattttgacacc
gctttgaaaatcgaagcccgctggttcaccaacgttctgatgaacccgtcctcgtcggcg
atgatccggacactgttcctcaacaaggaagcgcttgaaaaaggcgcggtccgtccgaaa
ggtgtgcccgatcaacgcgtcaagaaaatcggcgttctgggcgctggcatgatgggggcc
ggtatcgcactggtttctgcccaagctggcatggaggtcgttctgatcgaccgtgatcag
gaagcggccgacaaaggcaaagcttataccgaaacctatctggacaaaggtatcaaacgc
ggcaaggtcacggctgaaaagaaagaggccatgctggcgcgcatcacggcgacaccggat
ctggaccatctgaaagggtgtgacctgatcatcgaagccgtgtttgaagacatgggcgta
aaggccgagatgaccaaaaaggtcgaggcgatcatcccggaagactgcatctttgcctcg
aacacctcgaccctgccgatttcagatctggccaaggcaagcgtgcgtccggaccaattc
atcggcatccacttcttctcgccggtcgagaagatgttgctggtcgagatcatcaagggc
aaggaaaccggtgatcgcgccgttgccaaggctctcgactatgtgcgccagatccgcaag
acgccgatcgtggtcaacgatgcgcgcttcttctacgccaaccgctgcatcattccgtac
atcaacgaaggtgcacggatgatcaccgaaggcgtaagccccgtgctgatcgacaacgcg
gcgcgtcagctgggcttcccggtggggccgattcagctgaccgacgaaacctcgattgat
ctgggggccaagatcgcccgtgcgaccaaggcagccatgggcgatgcctatccggaaagc
ccctcggacgatctgatcttctggatggaagaacagggccgtttggggcgcaaggcaaac
gccggcttcttcgtctatgacgaaaagggcaaacgcgtcgaatactggaagggtcttcaa
gagaagtatccacttgccaaagaccagcccgacctgatcgaagtacaggagcgcctgatg
ttcgcgcaggttctggaagcggttcgggcgctggaagaaggtgtgctggaagacatccgt
gaaggcgacgtaggcgccattctgggctggggctttgcgccttggtccggtggtccgctc
agctggctcgacatcatcggcacgccctacgcagccgaacgatgcgatcagctggccgag
aaatatggcgaacgctttgcctgcccgccgctgctgcgtgagatggccgagaaggggcaa
accttctacgggcgcttcaaccccgaagcaaaagctgcctga
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