Ruegeria sp. YS9: NOR97_06130
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Entry
NOR97_06130 CDS
T10219
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy03030
DNA replication
ruy03430
Mismatch repair
ruy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOR97_06130
03430 Mismatch repair
NOR97_06130
03440 Homologous recombination
NOR97_06130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruy03032
]
NOR97_06130
03400 DNA repair and recombination proteins [BR:
ruy03400
]
NOR97_06130
Enzymes [BR:
ruy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOR97_06130
DNA replication proteins [BR:
ruy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NOR97_06130
DNA repair and recombination proteins [BR:
ruy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NOR97_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UUV07333
LinkDB
All DBs
Position
1:complement(1197568..1198980)
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AA seq
470 aa
AA seq
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MLTGLSLRLRIFLFFCLLAFGGVAISATALWITYSRAGNPDLLNDFVFAEILIGFGLLAL
VAGVWLLFDDNVAKPIERLSAQLRARAHAGVSTDLDMQAARYLGDLAPAAAGLAEQLASN
AMRTAEAVAAETAHLAAEKQRLTALLTEIPVAMLLASPKHQIVLYDGQAAEVLAQIAHPR
LNASLFEYLEATGLTDAYAKMCKTGKDVYCTLSSVDGRQTYSARMKPLGDAPGYMLVFED
SAAQMSPDDARPLVYDFELLNTPGDDAFENRPLSDLCFVVFDTETTGLLPHKDEIVQIGA
VRVLNGKIVQGEHLDMLVDPGIPIPPASTKVHKISDRMVQGAPDIAEAGRVFHQFSRDAV
IVAHNAPFDMAFLRRQADRMGVEWDHPILDTVLLSAVLFGASDTHTLDALCERLEITIPE
TLRHTALGDAVATAEALVKMLPILKARGLTTFGEVIMETRKHGRLLEDLN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccggattgagtttgaggctcaggatttttctgttcttctgcctcctggctttt
ggaggggttgcgataagtgccaccgctctctggatcacctattcccgcgcgggaaatcct
gatcttttgaatgatttcgtctttgctgaaatcctgatcggatttggattgctggcactg
gttgcaggtgtttggctgctatttgacgacaacgtcgccaaaccgatcgaacggctttcc
gcccagctgcgtgcccgtgctcatgccggtgtaagcaccgacctggacatgcaggccgcg
cgttatctgggcgatcttgccccggctgcggcgggattggcggaacaactcgcctcgaac
gccatgcgcacagccgaggccgtggccgccgaaaccgcgcatctggccgcagaaaaacaa
cgcctgaccgccctgttgaccgagatccccgtggccatgctgctggccagtccgaagcac
cagatcgttctgtacgatgggcaggccgccgaggttctcgcccagatcgcgcatcctcgt
ctgaacgcctctcttttcgaatatctcgaagccaccggcctgacagacgcttatgccaag
atgtgcaaaaccggaaaggacgtctattgcaccctgtccagcgtggatgggcggcagaca
tattccgcccggatgaaacctttgggggatgcacccgggtatatgctggtcttcgaagac
agcgcagcgcaaatgtcaccagatgatgcccgcccgctggtctatgatttcgaacttctc
aatacgccgggggatgatgcgttcgagaaccgccccctgtcggatctgtgcttcgtggtc
ttcgacacggaaacaaccggtttgctgccacacaaggatgagatcgtgcagatcggcgca
gtacgcgtcctgaacggcaaaatcgttcagggtgagcatctggacatgctggttgatccc
ggcattcccattccacctgcctcgaccaaggtacacaagatcagcgatcgcatggttcag
ggcgcgcccgatattgccgaagccgggcgcgtattccatcagttttcgcgtgacgcggtg
atcgtggcgcataacgccccgttcgatatggcgttcctgcgccgccaagccgatcggatg
ggtgttgaatgggatcatccgatactcgacacggtcttgctgtctgcggtgctgttcggg
gcaagcgacacgcacacactggatgccttgtgtgaaaggctggaaatcacgatccccgaa
acgttgcgccataccgcacttggcgatgcggttgccacggccgaggcattggtcaagatg
ctgccgatcctgaaagcccgtggcctgacgacttttggagaggtgatcatggaaacccgc
aaacatggtcgtttgctggaagatctgaactga
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