Ruegeria sp. YS9: NOR97_10735
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Entry
NOR97_10735 CDS
T10219
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy00470
D-Amino acid metabolism
ruy00550
Peptidoglycan biosynthesis
ruy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NOR97_10735 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NOR97_10735 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ruy01011
]
NOR97_10735 (murD)
Enzymes [BR:
ruy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NOR97_10735 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ruy01011
]
Precursor biosynthesis
Amino acid ligase
NOR97_10735 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UUV05107
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All DBs
Position
1:complement(2116319..2117719)
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AA seq
466 aa
AA seq
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MIPVKGFTGQRVAVLGLGRSGLATARALSAGGAEPVCWDDNPAARETAEGEGFFCADLRK
HGAFDDIASLIVSPGIPHLYPEPNPVVAAALDAGVPVDNDIGLFFRSFAGAEWNGYDTPP
RVIAVTGSNGKSTTAALIHHILTEAGREAQLAGNIGRGVLDIDPGGDGSVVVLELSSYQT
ELARALTPDVAVFTNLSPDHLDRHGGMGGYFAAKRRLFSEGGPDRAIIGVDETEGAFLAG
QLAEGPSDDRVIRVSVARKLTGPGWQVFARKGFLSEYRKGRQAGSIDLRAIKGLPGAHNH
QNACAAYAACRSLGLAPRVIEDALHSYPGLPHRSQIIAEADGVTYVNDSKATNVDSAVKA
LTAFKKIRWICGGLEKEGGISALNTATGEVIKAYVIGREAAGFAMQLEADAQVCTTMEAA
VAQAMEDAEAGETVLLAPAAASFDQYDNFEQRGDDFAAQVRLRLTE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaaaggctttacaggacagagagtagctgttctggggctgggccgatcc
ggcttggccactgcgcgcgccctgagtgcgggcggggccgagccagtgtgctgggatgac
aacccggccgcccgtgaaaccgccgaaggcgagggcttcttttgcgccgacctgcgcaag
catggggcatttgacgacattgcctcgctgatcgtctcaccgggcattccgcatctctat
cctgaaccgaaccccgtggtggcggcagccctggatgcaggcgtgcctgtggacaatgac
atcggcctgttcttccgctccttcgcgggggcggaatggaacggttacgacacgccgccg
cgcgtgattgcggtgacgggatcgaacgggaaatcgaccacggcggcgttgatccaccac
attctgaccgaggccgggcgcgaggcgcagttggcgggcaatatcgggcgcggtgttctg
gatatcgatccgggcggagatggttcggtcgtggtgctggagctttccagctatcagacg
gaactggcccgcgctctgacccccgatgtggcggtgttcaccaacctgtcgcccgatcat
ctggaccgccacggcggcatgggtggatatttcgcggccaaacggcgcctcttttccgaa
ggcggccccgaccgcgcgatcattggcgtcgacgaaaccgaaggtgcgtttttggccggg
caactggccgaagggccatcggatgaccgggtgatccgtgtctcggtggcgcggaagctg
accgggccgggctggcaggtctttgcgcgcaaagggttcctgtcggaataccgcaagggg
cggcaggcggggtctatcgacctgcgcgccatcaagggcctgcccggtgcgcataatcac
cagaatgcctgcgcggcctacgccgcctgccggtcgctgggccttgccccgcgcgtgatc
gaggatgcgctgcattcctatccgggtctgccgcatcgcagccagatcatcgccgaggcc
gatggggttacctacgtcaacgactccaaggcgaccaatgtcgacagcgccgtgaaggca
ttgaccgcgttcaaaaaaatccgatggatttgcggcggtcttgagaaagagggcggcata
tcagccctgaacacggcgacgggcgaggtcatcaaggcgtatgtgatcggacgcgaagcg
gccggttttgcgatgcagcttgaagcagacgcgcaggtctgcaccacgatggaggccgcc
gtggcacaagccatggaggatgccgaggccggtgaaacggtgctgttggcaccggccgcc
gccagtttcgaccaatatgacaatttcgaacagcgcggcgatgactttgcagcgcaagtc
aggctcaggctgacggaatag
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