Ruegeria sp. YS9: NOR97_12085
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Entry
NOR97_12085 CDS
T10219
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ruy Ruegeria sp. YS9
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ruy03009
]
NOR97_12085 (rimO)
Enzymes [BR:
ruy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NOR97_12085 (rimO)
Ribosome biogenesis [BR:
ruy03009
]
Prokaryotic type
ribosomal protein modification factors
NOR97_12085 (rimO)
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Ortholog
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Gene cluster
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Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YicC-like_C
Thioredoxin_6
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UUV05354
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All DBs
Position
1:2384885..2386273
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AA seq
462 aa
AA seq
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MTTNPPNLRPDLAPAARITETPQSNQPTIGMVSLGCPKALVDSERILTRLRAEGYGISPD
YAGADAVIVNTCGFLDSAKAESLDAIGEALVENGKVIVTGCLGAEPDYIREHHPRIMAVT
GPHQYEQVLDAVHAAVPPDPDPFVDLLPASSVQLTPRHYSYLKISEGCNHKCKFCIIPDM
RGKLASRPAHAVLREAEKLVDNGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRSHITDL
ARELGQLDAWVRLHYVYPYPHVRDLIPLMADAGCNVLPYMDIPFQHAHPDVLKRMARPAA
SARTLDEIKAWRAICPGITLRSTFIVGYPGETEAEFQTLLDWMDEAQLDRVGCFQYENVD
GARSNDLPDHVPAEIKQERWDRFMEKAQAISEAKLQAKVGQTLEVIVDEVDDEAATCRTK
ADAPEIDGNLFIDEGFENLRPGDIVTVEVDEAGEYDLWGKPV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaacccgccaaacctccgccccgacctggcgcctgctgcccggatcaccgag
acgccccaatcaaaccagccgaccatcggtatggtgtccttgggctgcccaaaggcgttg
gtcgacagtgaacgcattctgacccggctgcgtgccgaaggatacggcatttcgccagat
tatgccggggccgatgccgtcattgtgaacacctgcgggttccttgacagcgccaaggcg
gaatcgctggacgcgatcggagaggcgctggtggaaaacggcaaggtcatcgtaaccggc
tgtctgggcgcagaaccggattacattcgcgagcatcacccccgcatcatggctgtcacc
ggcccgcaccaatacgagcaggtgctggatgcggtgcatgccgctgtgccccccgatcct
gatccgttcgtggacctgttacccgccagcagcgttcagttgacgccgcgccactacagc
tatctgaaaatttccgagggctgcaaccacaagtgcaagttctgcatcatccccgacatg
cgcggaaagctggccagccgcccggcgcatgcggttctgcgcgaggcggaaaagctggtc
gacaatggcgtgcgtgaattgctggtgatttcgcaggacacctcggcctatgggctggac
cgcaaatacgatgtgaacccttggaaagacggtgaagtacgcagccatatcaccgatctg
gcgcgtgaactggggcagttggatgcctgggtgcggctgcactatgtgtatccctatccg
catgtgcgggacctgattccgctgatggcggatgccgggtgcaacgtgctgccttatatg
gatatcccgtttcaacacgcccacccggacgttctgaaacgcatggcacgcccggccgcg
tcggccagaacgctggatgaaatcaaggcctggcgcgcgatctgcccgggtatcaccctg
cgatcgacctttatcgtcggctatccgggcgagaccgaagccgaattccagaccctgctg
gactggatggacgaggcacaactggatcgtgtcgggtgttttcagtatgaaaacgtggat
ggcgcgcgctcgaacgacctgcccgatcacgtcccggccgaaatcaagcaggaacgctgg
gatcgcttcatggaaaaggctcaggcgatctcggaggccaagttgcaggcgaaggtcgga
cagacgcttgaggtgatcgtggacgaggtcgacgacgaggccgccacctgccgcaccaag
gcagacgcgcccgagatcgacggcaacctgttcatcgatgaagggttcgaaaacctcagg
cccggtgacatcgtcacggtcgaagtggacgaggccggagaatacgatttgtggggtaag
cccgtctaa
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