Ruegeria sp. YS9: NOR97_12185
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Entry
NOR97_12185 CDS
T10219
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy00220
Arginine biosynthesis
ruy00240
Pyrimidine metabolism
ruy00250
Alanine, aspartate and glutamate metabolism
ruy01100
Metabolic pathways
ruy01110
Biosynthesis of secondary metabolites
ruy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NOR97_12185 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NOR97_12185 (carB)
00220 Arginine biosynthesis
NOR97_12185 (carB)
Enzymes [BR:
ruy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NOR97_12185 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
UUV05374
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All DBs
Position
1:2397699..2401043
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AA seq
1114 aa
AA seq
DB search
MPRRTDIQSIMIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL
ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTSLALEEMGVLEKFGVEMIGAKR
EAIEMAEDRKLFREAMDRLGLENPKATIVTAPKREDGTTDLDAGVQMALDELEEIGLPAI
IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADN
AIIVCSIENVDPMGVHTGDSITVAPALTLTDKEYQIMRNGSIAVLREIGVETGGSNVQWA
INPDDGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITKVTPASF
EPTIDYVVTKIPKFAFEKFPGSEPYLTTAMKSVGEAMSIGRTIHESMQKALASMESGLTG
FDEVEIPGLNVGLWDEADDKAAVIKAISQQTPDRLRTIAQAMRHGLTDDEIFGVTKFDPW
FLARIREIIEAERQVRKDGLPVTEDGIRKLKMLGFTDARLGKLTGRDEDNVRRARRNLGV
SAVFKRIDTCAAEFEAQTPYMYSTYEAPMMGEVECEARPSDRKKVVILGGGPNRIGQGIE
FDYCCCHACFALTEAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKEQENG
TLHGVIVQFGGQTPLKLANALEAEGIPILGTTPDAIDLAEDRERFQALVNQLDLKQPKNG
IASTDAQALEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLRRYINEAVVVSGDSPVLLD
SYLAGAVELDVDALCDGTDVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEIIAQIKDQT
FKLAKALNVVGLMNVQFAIKDDEIYLIEVNPRASRTVPFVAKATDSAIASIAARVMAGEK
LASFPQRPPYKTVDDTKIADQMTLADPDMPWFSVKEAVLPFARFPGVDTILGPEMRSTGE
VMGWDRDFPRAFLKAQMGAGMVLPTSGRAFISIKDADKGAAMLEAAQVLVEQGFTLVATR
GTQSWLAEQGVPCDVVNKVYEGRPDVVDMLKDGQVQLLMNTTEGAQAVEDSKAIRSIALY
DKIPYYTTAAASHAAALAIKAQAEEDVEVKSLQG
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaagaaccgacatccagtcgatcatgatcattggggcgggccccattgttatc
ggtcaggcctgtgaattcgactattccggcgcccaggcttgcaaggccctgcgcgaggaa
ggttaccgggttattctggtgaactcgaacccggcgacgatcatgaccgaccccggcctg
gccgacgccacctatatcgagccgatcacacccgaggttgtcgccaagatcatcgaaaaa
gaacgccccgacgccctgttgcctaccatgggcggacagaccggcctgaacacctcgctg
gcactggaagagatgggcgtgctggagaaattcggggtcgagatgatcggcgccaagcgc
gaggccatcgaaatggccgaggaccgcaagctgttccgagaggcgatggatcggctgggg
ctggaaaacccgaaagcgaccatcgtaaccgcacccaagcgcgaggacggaaccaccgat
ctggatgccggtgtgcagatggcgcttgatgagctggaagaaatcggcctgcccgccatc
atccgccccgcctttacgctgggcggcaccggtggcggtgtggcctataaccgcgaggat
tacatccatttctgccgctcgggcatggatgcctcgccggtcaatcagatccttgtcgat
gaaagcctgctgggctggaaggaatacgagatggaggtggtccgcgacaccgctgacaac
gccatcatcgtctgttccatcgaaaacgtcgatccgatgggcgtacacacaggtgactcg
atcaccgtggcccctgccctgacgctgaccgacaaggaataccagatcatgcgcaacgga
tcgattgccgttctgcgcgagatcggcgtcgaaaccggtggttcgaacgtgcaatgggcg
atcaaccccgatgatggccgcatggtcgtgatcgagatgaacccgcgcgtgtcccggtct
tctgcattggcctcgaaagcgaccggtttcccgattgccaagatcgcagccaagctggcc
gttggttacacgctggacgagctggacaacgatatcaccaaggtcacgcctgcatccttc
gagccgaccatcgattatgtcgtcaccaagataccgaaattcgcgttcgagaaattcccc
ggttcggaaccctacctgaccaccgcgatgaagtcggtgggcgaggcgatgtcgatcggc
cgcacgatccacgaatcgatgcaaaaggcgctggcgtcgatggaatcgggcctgaccggc
tttgatgaggtcgaaatccccggcctgaacgtgggcctgtgggacgaagccgatgacaag
gccgccgtgatcaaggcgatcagccagcagacaccggaccgtctgcgcaccattgcgcag
gcgatgcgccatggcctgaccgatgacgagatattcggtgtcaccaagttcgacccgtgg
ttcctggcccgcatccgcgagatcatcgaggccgaacgtcaggtacgcaaagacggcctg
cccgtcaccgaggacggtatccgcaagctgaaaatgctgggctttaccgacgcgcgtctg
ggcaagctgacgggccgcgacgaagacaacgttcgccgtgcgcgccgcaatctgggcgtt
tcagcggtgttcaaacgcatcgacacctgcgcggccgagttcgaggcgcagacgccttac
atgtattcaacctacgaagcgcccatgatgggcgaggtcgaatgcgaggcgcgcccgagt
gaccgcaaaaaggtcgtcattcttggcggcggcccaaaccgcatcggtcagggcatcgag
ttcgactattgctgctgccacgcctgcttcgcactgaccgaagcggggtatgaaaccatc
atgatcaactgcaaccccgagacggtttcgaccgattatgacacttcggatcgcttgtat
ttcgaaccgctgacctttgaacacgtcatggaaatcctgacgaaggaacaggaaaacggc
acgcttcacggtgtgatcgttcagttcggtggacagaccccgctgaaactggccaacgcg
ctcgaggccgaaggcatcccgatcctgggcaccacgcccgacgcgatcgacctggccgaa
gaccgcgaacgttttcaggcgctggtcaaccagctggacctgaagcagcccaagaacggc
atcgcctcgaccgacgctcaggcgctggagattgcagaagagatcggctttccgctggtg
atccgcccctcctacgttctgggtggccgcgcgatggagatcgtgcgcgatatggatcag
ttgcgacgctacatcaacgaagccgtggtggtctcgggcgacagccccgttctgctggac
agctatctggccggcgcggtcgagctggacgtggatgcgctgtgcgatggcaccgacgtg
catgtggccggtatcatgcagcatatcgaagaggccggcgtgcattcgggcgatagcgcc
tgttcgctgccgccctattcgctgtcgaaagagatcatcgcgcagatcaaggatcagacg
ttcaagctggccaaggccttgaacgttgtcggcctgatgaatgtgcagttcgcgatcaag
gatgacgagatctacctgatcgaggtgaacccgcgcgcctcgcgcaccgtgccgttcgtg
gcaaaggccaccgacagtgcgattgcgtccatcgccgcgcgcgtcatggcgggcgaaaag
ctggcaagtttcccgcagcgcccgccgtacaagaccgtggacgacaccaagatcgccgat
cagatgacgctggccgaccctgatatgccgtggttctcggtgaaagaggcggttctgccc
ttcgcccgtttcccgggcgtcgataccatcctgggtccggaaatgcgctcgaccggcgag
gtcatgggctgggaccgcgatttcccgcgcgctttcctcaaggcgcagatgggcgcgggc
atggtcctgccaacctcgggccgggcctttatttcgatcaaggatgccgacaagggcgcg
gcgatgctcgaggccgcacaggttttggtcgaacaaggcttcacgctggtcgccacccgc
ggcacgcaaagctggctggcggaacagggtgtgccctgcgacgtggtcaacaaggtctat
gagggccgcccggacgtggtcgacatgctgaaagacggtcaggtgcagcttttgatgaac
accaccgaaggcgcgcaggcggtcgaggacagcaaggccatccggtccatcgcgctttat
gacaagatcccatactacaccaccgccgctgcaagccacgctgccgcgctggcgatcaag
gcgcaggccgaagaggatgtcgaggtgaagtcgctacagggataa
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