Ruegeria sp. YS9: NOR97_13245
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Entry
NOR97_13245 CDS
T10219
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy03030
DNA replication
ruy03430
Mismatch repair
ruy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOR97_13245
03430 Mismatch repair
NOR97_13245
03440 Homologous recombination
NOR97_13245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruy03032
]
NOR97_13245
03400 DNA repair and recombination proteins [BR:
ruy03400
]
NOR97_13245
Enzymes [BR:
ruy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOR97_13245
DNA replication proteins [BR:
ruy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NOR97_13245
DNA repair and recombination proteins [BR:
ruy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NOR97_13245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_19
DUF1778
AAA_16
AAA_14
AAA_24
SLFN-g3_helicase
TIP49
AAA_18
Rad17
Glyco_tranf_2_5
DUF815
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
UUV05577
LinkDB
All DBs
Position
1:2617976..2619742
Genome browser
AA seq
588 aa
AA seq
DB search
MTDSSSPAYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTT
ARIIAKGMNCIGPDGTGGPTTEPCGQCEHCVAIMEGRHVDVMEMDAASRTGVNDIREIID
SVRYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSR
CQRFDLRRIEPEDMIGLLRKIAEAENARIAEDALALITRAAEGSARDATSLLDQAISHGA
GETTADQVRAMLGLADRGRVMDLMDMILRGDAAGALTELSGQYAEGADPLAVLRDLAEIT
HWVSVVKITPDAAQDPTVSPDERTRGQQMAEALPMRVLTRMWQMLLKALEEVSAAPNAMM
AAEMAVIRLTHVADLPSPEELIKRLQDTPPLPPGGPNGGVSISRPGAAGPAPAGAAHPPA
FASPSRGAGGAPVAALAQDTQTALARYPTFDHVVELIRTNRDVKLLVEVENGVRLVSYQP
GRIEFTPAAQAPADLAPRLGSALQRWTGNRWAVSIVSDGEAPTIAEIRDEAELALKSEAE
QHPLVQAVLAQFPKARITNIETPEQRAAKVETEALPEVEDEWDPFEED
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagctccagccccgcctatcaggttctcgcccgcaaatatcgcccggaaacc
tttgccgatctggtgggtcaggatgccatggtgcgcaccctgaaaaacgcgttcgcggcc
gatcggatcgcgcaggctttcatcatgaccggcattcgcggcaccggcaaaaccacgacc
gcgaggatcatcgccaagggcatgaattgcatcggtccggacggaaccggcggccccaca
accgaaccctgcggtcagtgcgaacattgtgtcgccatcatggaaggccgccatgtcgac
gtgatggagatggacgccgccagccgcacaggcgtcaacgatatccgcgagatcatcgac
agcgtgcgctatcgcgccgccagcgcgcgttacaagatttatatcatcgacgaggtccac
atgctctcgaccagcgccttcaacgcgctgctcaagacgttggaagaaccgcccgcgcat
gtgaagttcatcttcgcgaccactgaaatccgcaaagtgcctgtcactgtgctgtcccgc
tgccagcgtttcgacctgcgccggatcgagcccgaagacatgattggcctgctgcgcaag
atcgccgaagcggaaaacgcccggatcgccgaagacgcgctggcgctgatcacccgagca
gcggaaggatcggcccgggacgcgacctcgttgctggatcaggcgatttcgcacggggct
ggcgagacgaccgccgatcaggttcgtgcaatgcttggactggcagaccgtggccgggtt
atggaccttatggatatgatcctgcgcggcgatgccgccggagcacttaccgagttgagc
ggccaatacgccgaaggcgcggacccgctggcggtgctgcgcgatctggccgaaatcacg
cattgggtgtccgtcgtgaagatcacgcctgacgcggcgcaggacccgacggtttctccg
gacgaacggacccggggccaacagatggccgaggctctgccgatgcgggtcctgacccgg
atgtggcaaatgctgctgaaggcgctcgaggaagtctcggctgcccccaacgccatgatg
gccgctgaaatggccgttatccgcctgactcatgtggctgatttgcccagtcccgaagaa
ctgatcaagcgattgcaggataccccgccgctgccgccgggcgggcccaatggcggcgtt
tcgatatcccgaccgggcgccgccggtccggcgccggctggcgcggcccatccgcctgcc
ttcgcatcgccctctcgcggtgccggtggtgcgccggttgcagccttggcgcaggatacc
caaacggcccttgcgcggtacccgaccttcgaccacgtggtcgaactgatccggaccaat
cgcgacgtgaagctgctggtcgaggtggaaaacggcgtgcgcctcgtctcctatcaaccc
gggcgaatcgaattcacacccgccgcccaggcaccggcggatctggctccacggctgggc
tctgccttgcaacgctggacaggaaaccggtgggctgtctcgatcgtctcggacggagaa
gcccccacaattgcagaaatacgggacgaggccgagctggcactgaagtccgaggctgaa
caacaccctttggttcaggctgtgctggcgcaattccccaaggcgagaatcaccaatatc
gaaacgccggaacaacgcgccgccaaggtcgagaccgaagcgcttcccgaggttgaagac
gagtgggacccgttcgaggaagattga
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