Ruegeria sp. YS9: NOR97_13835
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Entry
NOR97_13835 CDS
T10219
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy00260
Glycine, serine and threonine metabolism
ruy00270
Cysteine and methionine metabolism
ruy00450
Selenocompound metabolism
ruy00670
One carbon pool by folate
ruy01100
Metabolic pathways
ruy01110
Biosynthesis of secondary metabolites
ruy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NOR97_13835
00270 Cysteine and methionine metabolism
NOR97_13835
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NOR97_13835
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NOR97_13835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ruy04147
]
NOR97_13835
Enzymes [BR:
ruy01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
NOR97_13835
Exosome [BR:
ruy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NOR97_13835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UUV05695
LinkDB
All DBs
Position
1:2732787..2733884
Genome browser
AA seq
365 aa
AA seq
DB search
MAPKTGEMLHLRGNALSKGEPVALPLTQSSMYHLPGAPDGQASYGRVDNPTWVHLEHVLS
HLEDAPCLSFPSGMAAISAALFATVKAGSRLLIPSDGYYVTRLLADRFLSRLGVIVEERP
TIAFAEGGFDGFDVVFAESPSNPGLDMIDLTTVADQVRAAGGVTIADNTTMTPLGQRPLD
LGIDVVVSSDTKAMGGHSDMLMGHVASRDSDIMERVGEWRKVSGSIPGPHEAWLLHRGLE
TLDVRFDRMCSSAEVLAERLAAHPAVKRVRYPGLADDPSHKLAQEQATRFGFLLSLTLNS
EDQAEAFINNCPLLRPATSFGGVHSSAERRARWGDDVDPAFIRLSVGCEPVDELWHAIET
SLNAV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaagaccggagagatgctgcatctgcgcggaaatgccctgagcaagggcgaa
cctgtggcgctgccgctgacccaaagcagcatgtaccacctgccgggcgccccggacgga
caggcgagttacggccgggtggacaacccgacctgggtgcatctggaacatgttctgtcg
catttggaagacgcaccgtgcctcagctttccctcgggcatggcggcgatttccgcggcg
ctgtttgccaccgtaaaggccgggtcacgcctgctgatcccctccgacggctattacgtg
acgcgccttttggccgatcgtttcctgtcgcggctgggtgtgattgttgaagaacgcccc
accatcgcctttgccgaaggcggttttgacggattcgatgttgtctttgccgaaagcccc
tcgaatcccgggttggacatgatcgatctgacaacggtcgcggatcaggtgcgtgctgcc
gggggcgtaaccattgccgacaacacgacgatgacgccgctgggtcagcgccctctggat
ctgggcatcgatgtggtcgtctcgtccgataccaaggcgatgggcgggcattccgacatg
ctgatgggccatgtggccagccgcgacagcgacatcatggaacgggtcggggaatggcga
aaagtctccggctcgattccggggccacatgaagcatggctgctgcatcgcggccttgaa
actctggacgttcggttcgaccggatgtgcagctcggctgaagtattggccgaacgcctg
gcagcacatcccgcagtgaaacgggttcgctatcccgggctggccgatgacccgtcgcac
aaactggcgcaagagcaggccacacggttcggctttctactgtccctgacgctgaacagc
gaagaccaggccgaagccttcatcaacaattgcccgcttctgcgcccggccacgtcattc
gggggcgtccacagctcggccgagcggcgcgcgcgttggggcgacgacgttgatccggcc
ttcatccgcctgtccgtcggatgcgaaccagtggacgaactatggcacgctatcgaaacc
agcctgaacgctgtgtga
Ruegeria sp. YS9: NOR97_19450
Help
Entry
NOR97_19450 CDS
T10219
Name
(GenBank) methionine gamma-lyase
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy00270
Cysteine and methionine metabolism
ruy00450
Selenocompound metabolism
ruy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NOR97_19450
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NOR97_19450
Enzymes [BR:
ruy01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
NOR97_19450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
Beta_elim_lyase
DegT_DnrJ_EryC1
GDC-P
SelA
NmrA
Motif
Other DBs
NCBI-ProteinID:
UUV08095
LinkDB
All DBs
Position
2:complement(691523..692722)
Genome browser
AA seq
399 aa
AA seq
DB search
MTRSTGFATRAIHHAYNPLENDGALTPPLHLTSTFAFESAEAGGEMFAGERAGHIYSRIS
NPTCDLLEQRIAVLEGAEAGLALSSGMGAITAVLWTLLSPGDEVIVDKTLYGCTFAFMRH
GLAKWGVTITHVDMTDPENLKAALSDKTRVVYFETPANPNMRLVDIAASAEIAHSVGATV
VVDNTYASPYLTRPIEHGADIVLHSATKYLGGHGDVVAGLVVGTAEQIAEIRLVGMKDMT
GAVMAPFNAMLILRGLKTLNLRLDRHCASARVVADFLEAHPAVGEVCFPGLKSFAQHDVA
QRQMSQPGAMIAFEIKSGLSGGIEFMNRLNMIQRAVSLGDAETLIQHPASMTHSTYTPEE
RAEHGISDGLIRLSVGLEDVEDILADLEQALPYPARSAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgactcgttcaaccggatttgccacccgcgccattcaccacgcttacaaccctttggaa
aatgacggcgcccttaccccaccgctgcatttgacgtccacgtttgccttcgaatccgca
gaggctggtggagagatgttcgccggtgaacgcgcaggtcatatctacagccgaatttcg
aaccccacatgtgaccttctggaacaacgcattgcggtgcttgaaggggccgaggccgga
ctggccttgtccagcggcatgggggcgataacggcagtgctttggactctgctgtcgcca
ggggacgaagtcatcgtggacaaaacactctatggctgcaccttcgccttcatgcgccac
ggtctggcgaaatggggggtcacgatcacccatgtcgacatgacggaccccgagaacctg
aaagcggcgctttctgacaaaacccgcgttgtctatttcgaaactccggccaacccgaac
atgcgccttgtggacattgccgccagcgccgagatcgcgcattcggtcggtgcaacggtt
gtcgtcgacaacacctatgccagcccctatctgacccgcccgatcgagcacggggcggat
atcgttctgcattccgccaccaaatatcttggcggacatggcgatgtggtcgccggtctg
gttgttggcaccgccgaacagattgccgaaatccgcctggtcggaatgaaggatatgacc
ggtgcggtcatggcccctttcaacgcgatgctgatcctgcgcggactgaaaacactgaac
ctgcgtctggatcgtcactgtgcctccgccagggtcgttgcagatttcctcgaggcccat
cccgccgtcggcgaggtttgtttccccgggctgaaaagctttgcccagcatgatgtcgca
cagcggcaaatgtcccaacccggcgccatgatagcgttcgagatcaagtccggcctgtcc
ggtgggattgaattcatgaaccgcctcaacatgatccagcgcgcggtgtccttgggcgat
gccgaaacgctgatccagcaccccgcatccatgactcattcgacctatactccggaggaa
cgggccgagcatgggatcagcgatggtttgatccgtctgtctgttgggttggaggacgtc
gaagatatcctcgccgacctggagcaagctctgccctatcctgcccgcagcgccgcctga
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integrated database retrieval system