Ruegeria sp. YS9: NOR97_14165
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Entry
NOR97_14165 CDS
T10219
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOR97_14165 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ruy03019
]
NOR97_14165 (pnp)
03016 Transfer RNA biogenesis [BR:
ruy03016
]
NOR97_14165 (pnp)
Enzymes [BR:
ruy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NOR97_14165 (pnp)
Messenger RNA biogenesis [BR:
ruy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NOR97_14165 (pnp)
Transfer RNA biogenesis [BR:
ruy03016
]
Prokaryotic type
tRNA degradation factors
NOR97_14165 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
UUV05756
LinkDB
All DBs
Position
1:2795653..2797803
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AA seq
716 aa
AA seq
DB search
MFDVTKKSIQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAREQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVDGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGARVGFVDGEYVLNPTVDDMQDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELSEAEMLGAVNFAHEQIQPVIDLIISLAEEAAKEPFDFQ
APDYSELYAAVKAAGEEQMRAAFAITDKQERTAAVAAAREAIKEALTEEQLEDGNLGSAM
KKLEAGILRGDVVRGGKRIDGRSTTDIRPIVAETSILPRTHGSALFTRGETQALAVTTLG
TGDDEQFVDALHGNFKSNFLLHYNFPPYSVGEVGRVGPPGRREVGHGKLAWRALQAVLPA
PTDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGEYA
VLTDILGDEDHLGDMDFKVAGTEYGITSLQMDIKVAGITPQIMETALAQAKEGRMHILGE
MGKALSETNDFSVHAPRIETMNIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVIKI
ASPDGESIQKAYDMIHSIVAEPEEGQIYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKCVDQETGEEIVPEKKEKKEENAE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtaacgaaaaaatcaattcagtggggcgaagagacgctgacactggaaacc
ggcaaggttgcccgtcaggccgacggcagcgtgattgccaccctgggcgaaaccagcgtc
atggccaacgtgaccttcgccagggaacagaagcccggtcaggactttttcccgctgacc
gtgcattaccaagagaaatactatgccgccggcaaggtgccgggtggcttcttcaagcgc
gaagcacgcccgaccgagaaagagacgctgaccgcgcgtctgatcgaccgtccgatccgc
ccgttgttcgttgacggcttcaaaaacgaagttctggtgatgtgtaccgtgctgagccac
gatctggtcaacgatcccgacatcgttgcgatgattgctgcttcggctgctctgaccatt
tccggcgcgccgttcatgggcccgattgccggtgcccgtgttggtttcgtggatggcgaa
tacgtcctgaacccgaccgtggacgacatgcaggacctgcgcctgaaccccgaacagcgt
ctggacctggttgtggccggcaccaaagacgccgtgatgatggtggaatcggaagcgtac
gaactgtccgaagcggaaatgctgggtgcggtgaactttgcgcatgagcagatccaaccg
gtcatcgacctgatcatctcgctggcggaagaagccgcgaaagaaccgtttgacttccag
gcgccggattattccgagctttatgccgccgtcaaggctgccggtgaagagcagatgcgc
gccgccttcgcgatcaccgacaagcaagaacgcaccgccgctgttgccgctgcccgcgaa
gcgatcaaagaagcgctgaccgaagagcaactggaagacggcaatctcggttccgcgatg
aaaaagctggaagccggcattctgcgcggcgacgtcgtcaggggcggcaagcggatcgac
ggtcgctcgaccaccgatatccgtccgatcgttgcagaaacctcgattctgccccggacc
cacggttctgccctgttcacccgcggtgaaacacaggcgctggccgtgaccacgctgggc
accggcgacgacgagcagttcgtcgacgcgctgcacggcaacttcaaatcgaacttcctg
ctgcactacaacttccccccgtattcggtgggtgaagttggccgtgttggccctccgggc
cgtcgcgaagtgggccacggcaaactggcctggcgcgcgcttcaggcggttctgcctgcg
ccgaccgatttcccctacaccattcgcgtggtgtcggagatcactgaatccaacggatca
agctcgatggcctctgtctgcggcggttcgctgtcgatgatggatgcgggggttccgctg
aaagcgccggttgccggtgtggccatgggtctgatcctggaagatgacggtgagtacgct
gttctgaccgacatcttgggtgacgaagaccacctgggcgacatggacttcaaggttgcg
ggcaccgagtacggcatcacctcgctccagatggacatcaaggttgccggcatcacgccg
cagatcatggaaaccgccctggcacaggccaaggaaggccggatgcacattctgggcgag
atgggcaaagccctgtccgagaccaacgatttctcggtccacgccccgcgcatcgaaacc
atgaacattccgaccgacaagatccgcgaagtgatcggttcgggcggcaaggtcatccgc
gagatcgtcgaggtttcgggcgccaaggtcgacatcaacgacgatggcgtcatcaagatc
gcctcgcccgatggtgagtcgatccagaaggcctatgacatgatccattcgatcgtggca
gaacctgaagaaggtcagatctataccggcaaagtggtcaagatcgtcgatttcggcgcc
ttcgtgaacttcttcggcaagcgtgacggtctggtccacgtgtcgcagatcgaaaaccgc
cgcctgaaccatccgtcggatgttctgaaagaaggtcaggaagtcaaagtcaaactgctg
ggctttgacgatcgcggcaaggtgcgcctgtcgatgaaatgcgtcgatcaggaaaccggc
gaagagatcgtgcctgagaaaaaagaaaagaaagaggaaaacgcagagtaa
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