Ruegeria sp. YS9: NOR97_14840
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Entry
NOR97_14840 CDS
T10219
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ruy Ruegeria sp. YS9
Pathway
ruy00300
Lysine biosynthesis
ruy00470
D-Amino acid metabolism
ruy01100
Metabolic pathways
ruy01110
Biosynthesis of secondary metabolites
ruy01120
Microbial metabolism in diverse environments
ruy01230
Biosynthesis of amino acids
Module
ruy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ruy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NOR97_14840 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NOR97_14840 (dapF)
Enzymes [BR:
ruy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NOR97_14840 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UUV05885
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Position
1:2928167..2929009
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AA seq
280 aa
AA seq
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MPAMQQRLDTGLPFIKMHGLGNDFVIVDARAQDAPITPALAKGIGHRQFGVGFDQLAVIE
NGEADAHLVFYNSDGSTSAACGNATRCIARLLMAETGRSALTLTTERGTLHAQDAGDGLT
AVNMGHPQLDWREIPLAEEMDTLELPIEGTPTATGMGNPHCTFFVENAEAIPLAEFGARY
EYHPLYPERTNVQVAQVIGPDHIRMRVWERGVGITLASGSSSCATAVAAARRGLTGRKVQ
IDLDGGTLWVDWRDDGVWMTGPTCHVFSGTLTPEFLRSLG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccatgcaacagagactcgacaccggattgcccttcatcaagatgcacgggctg
ggcaatgactttgtcatcgttgacgcacgcgcgcaggatgctccgatcacaccggcgctg
gccaaaggaatcgggcatcggcaatttggggtgggattcgatcagttggccgttatcgaa
aatggtgaagccgacgcgcatctggtgttctacaattccgatggatcaacctctgccgcc
tgcggcaacgccacccgctgtattgcacgattgcttatggctgagacgggtcgctctgcg
ctgacgctcaccaccgaacgcggaacccttcatgcgcaggatgctggcgatgggcttact
gcggtcaacatggggcacccgcagctggactggcgcgaaattccgctggcagaagagatg
gacacgctggaattgccaatcgaaggaacgccgacggcaacgggaatgggcaacccgcat
tgcacgttcttcgttgagaacgccgaagcgatcccgttggcagagttcggtgcgcgttac
gaataccacccgctttatcccgaacgcacaaatgtgcaggtggcacaagtcattggcccg
gatcacatccgtatgcgcgtatgggagcgcggagttggcatcactctggcctccgggtct
tcgtcctgtgcaacggccgtagccgccgcgcgacgggggctgaccgggcgcaaagtacag
atcgatctggatggcggcacactctgggtcgactggcgcgacgatggtgtctggatgacc
gggccgacgtgtcacgttttctctggcactctgacgcctgaatttctgaggtcgctggga
tga
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