KEGG   Ruegeria sp. YS9: NOR97_15700
Entry
NOR97_15700       CDS       T10219                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ruy  Ruegeria sp. YS9
Pathway
ruy00061  Fatty acid biosynthesis
ruy00071  Fatty acid degradation
ruy01100  Metabolic pathways
ruy01212  Fatty acid metabolism
ruy02024  Quorum sensing
ruy04146  Peroxisome
Module
ruy_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ruy00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    NOR97_15700
   00071 Fatty acid degradation
    NOR97_15700
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    NOR97_15700
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NOR97_15700
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ruy01004]
    NOR97_15700
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ruy04147]
    NOR97_15700
Enzymes [BR:ruy01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     NOR97_15700
Lipid biosynthesis proteins [BR:ruy01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   NOR97_15700
Exosome [BR:ruy04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   NOR97_15700
  Exosomal proteins of breast cancer cells
   NOR97_15700
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: UUV07827
LinkDB
Position
1:3106566..3108509
AA seq 647 aa
MHSLPALLHRNATQFGDAPAYREKEFGIWQCWTWAETAAEIRALALGFLELGVEKGDHIA
VIGRNRPAHYWSMVAAQMVGAVPVPLYQDAVAEEMAYVLEHCGAKYVVCGDQEQVDKVIE
IQENLHQVKHILYTDKRGMRKYDHSQMNALDDIKAEGSAGHARFDAELDRRIGEITYDDT
CVMLYTSGTTGKPKGVVLSNRNVIESARNSAEFDHLTRNEDILSYLPMAWVGDFIFSIGQ
AYWCGFCVNCPESADTMMTDLREIGPTYFFAPPRVFETQLTNVMIRMQDASAPKQRMFNF
FMDHAKKVGGRILDGQPVGFMDRLKYAIGNILVYGPLKDTLGYGRIRVGYTAGEAIGPEI
FEFYRSLGINLKQLYGQTEATVFITVQPDGEVRADTVGVPAPDVELKIADNGEIYYRSPG
VFVEYYKNPDSTASTKDPEGWVATGDAGFIEERSGHLRIIDRAKDVGKMADGSMFAPKYV
ENKLKFYPDILEAVLFGNGKDRCVAFINIDLTAVGNWAERNNVAYASYQELAGHPRVLET
IKAHVEEVNKSVAADEMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRGFVEDKFSDIIA
ALYDGSKTVSTTTEVTYEDGRKGSISATLEIVDAPVVPVAQHKVAAE
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgcactcccttccggcgctgctacatcgcaatgcgacgcagttcggggatgccccggct
taccgcgaaaaggaattcgggatctggcaatgctggacctgggcggaaacggccgccgag
atccgcgcgttggcgctgggatttctggagcttggcgttgaaaagggtgaccacatcgcc
gtgattgggcgcaaccgtccggcacattactggtcaatggttgcggcgcagatggtcggt
gccgttccggtgcctctctatcaggacgcggttgccgaagagatggcctatgtgctggaa
cactgcggcgcgaaatatgtcgtctgtggcgatcaggagcaggtcgacaaggtcatcgag
attcaggaaaacctgcatcaggtcaaacacatcctctataccgacaagcgggggatgcgg
aaatacgatcacagccagatgaatgcccttgatgacatcaaggccgagggcagcgccggt
catgcgcgtttcgacgccgaactggacaggcgcatcggtgagatcacctatgacgacacc
tgcgtgatgctctatacctcgggcaccacgggcaagcccaagggcgtggtgctgtcgaac
cgcaacgtgatcgaaagcgccaggaactcggccgagttcgatcacctgacccggaacgaa
gacatcctgtcctatctgccgatggcctgggttggtgatttcatcttttccatcggtcag
gcttactggtgcggcttctgcgtgaactgccccgagagcgcagacacgatgatgaccgac
ctgcgcgagatcgggccgacctatttcttcgccccgccgcgggtcttcgagacccagctg
accaatgtgatgatccgcatgcaggatgccagcgcgcccaagcagcggatgttcaacttt
ttcatggaccacgccaagaaggtgggcgggcgcatcctggatggccaacccgtcggcttc
atggaccgcctgaaatacgcgatcggcaacatcctggtctatgggccgctcaaggatacg
ctgggctatggccggatccgcgtgggttacaccgcgggcgaggcgatcgggcccgagatc
ttcgagttctaccgctcgctggggatcaacctcaaacagctctatggccagaccgaggcg
accgtgttcatcaccgtccagcccgacggcgaggtgcgggccgacaccgttggcgtcccg
gcccccgatgtcgagctgaaaatcgccgacaatggcgagatctactatcgctcgcccggc
gtgttcgtcgagtattacaagaacccggactcgaccgcatcaaccaaggaccctgaaggc
tgggtggccacgggcgacgcggggttcatcgaggaacgctcgggtcatctgcggatcatc
gaccgcgccaaggacgtgggcaagatggcagacgggtcgatgttcgcgccgaaatatgtc
gagaacaagctgaagttctatccggatattctggaggcggtgctgttcggcaatggcaag
gatcgctgcgtggccttcatcaatatcgatctgaccgcggtcggcaactgggccgagcgc
aacaacgtggcctatgcctcgtatcaggaactggcgggacatccgcgcgtgttagagacg
atcaaggcccatgtggaagaggtgaacaagtcggttgccgctgacgagatgctgtcgggc
tgtcaggtgcaccgctttgtggttctgcacaaggaactggatgccgacgatggcgagatg
acccggacccgaaaggtgcggcgcgggtttgtcgaggacaagttcagcgacatcattgcc
gcgctttatgacgggtccaagacggtttcgaccacgaccgaggtgacctatgaggatggg
cgcaaggggtcgatctcggcgacgctggaaatcgtcgatgcgccggttgttcccgtcgcc
caacacaaggttgccgcagaatga

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