Rhodomicrobium vannielii: Rvan_0069
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Entry
Rvan_0069 CDS
T01353
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rvan_0069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rva03019
]
Rvan_0069
03016 Transfer RNA biogenesis [BR:
rva03016
]
Rvan_0069
Enzymes [BR:
rva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rvan_0069
Messenger RNA biogenesis [BR:
rva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rvan_0069
Transfer RNA biogenesis [BR:
rva03016
]
Prokaryotic type
tRNA degradation factors
Rvan_0069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADP69359
UniProt:
E3I505
LinkDB
All DBs
Position
complement(79395..81524)
Genome browser
AA seq
709 aa
AA seq
DB search
MFDIFREEVEWGGRKLTLETGRIARQADGAVLAHYGETSVLATVVGERDADPSKDFFPLT
VNYQEKAYAAGKIPGGYFKREGRPTERETLVSRLIDRPIRPLFAHGFKNETQVIVTVLSH
DMENDPDIVAMVAASAALTISGLPFLGPIAASRVGYSKGEYILNPTSDQIKASDLDLVVA
GTVDAVLMVESEAKELSEDIMLGAVVFGQQGYKPVIDAIIGLAEQAAKEPWTIPDAKNEF
ESKVKKLVEKDLKKAFQIAGKQERQTKVAEAKAKAIAEFVSAESTAGEKNKVAEAFKEIE
KHVVRTSILKTGKRIDGRDLKTVRPILSQVGVIPRTHGSSLFTRGETQALVVATLGTGED
EQWIDSLEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVHPMMPKSDTF
PYTVRVVSEITESNGSSSMASVCGASLSLMDAGVPIKAPVAGIAMGLIKEAEGVAVLSDI
IGDEDHLGDMDFKVAGSANGVTALQMDIKITGITTEIMKIALEQAHEGRLHILGEMSKAL
NAARGELGEFAPRIETITIPTDKIREVIGSGGSVIRSIVEESGAKIDISDDGTVKIAAAN
LSSIQDAINRIKSIASEPEVGVIYKGKVVKIVEFGAFVNFFGSRDGLVHISQMAERRLKH
ASEVVKDGQEVYVKCLGFDERGKVRLTMKGIDQTDGKEVAAAPAEQPAG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcttccgcgaagaagtggaatggggcggtcgcaagctgacgctcgaaacg
ggccggattgcacggcaggcagatggcgcggtgctcgcgcattatggcgagacgagtgtg
ctcgcaaccgtggtcggcgaacgtgacgcggacccgtcgaaagacttcttccccctcacg
gtgaattaccaggaaaaggcctacgcggccggcaagatccccggcggctatttcaaacgc
gaaggccgcccgaccgaacgcgagacgctcgtctcccgcctcatcgaccgcccgatccgt
ccgcttttcgcgcacggcttcaagaacgagacgcaggtcatcgtgaccgtgctcagccac
gacatggagaacgatcccgatatcgtcgccatggtcgccgcttcggccgcgctgacgatt
tccggcctccccttcctcgggccgatcgccgcttcccgcgtcggctactcgaagggcgaa
tacattctcaacccgacctccgaccagatcaaggcgagcgacctcgacctcgtcgttgct
ggtacggtcgacgccgtgttgatggtggaatccgaagcgaaagagctgtcggaagatatc
atgctcggcgcggtcgtcttcggccagcagggctataagccggtcatcgatgccatcatc
ggcctcgccgaacaggccgcgaaagagccgtggacgatccctgacgcgaagaacgagttt
gaatccaaggtgaagaagctcgtcgagaaggacctcaagaaggccttccagatcgcgggc
aagcaggagcggcagaccaaggtcgccgaggcgaaggccaaggccatagccgaattcgtc
tccgcggaatcgaccgctggcgaaaagaacaaggtcgccgaggccttcaaggaaatcgag
aagcacgtcgttcgcacgagcattctcaagaccggcaagcgcatcgacggccgcgacctc
aagaccgttcgcccgatcctttcgcaggtcggcgtgatcccgcgcacgcacggctcgtcg
ctgttcacgcgcggcgagacgcaggcgcttgtggtcgccacgctcggcaccggcgaggac
gagcagtggatcgactcgctggaaggcacctacaaggaatccttcctgctgcattacaac
ttcccgccctactcggtcggcgagacgggccgcatgggttcgcccggccgccgcgaaatc
ggccacggcaagctcgcctggcgcgcagttcatccgatgatgccgaagagcgacacgttc
ccctacaccgtgcgcgtcgtgtccgagatcaccgaatcgaacggctcgtcctccatggcg
agcgtgtgcggtgcgtcgctgtcgctgatggacgcgggcgtgccgatcaaggcgccggtc
gcgggcatcgcgatgggcctcatcaaggaagccgaaggcgtggccgtcctctccgacatc
atcggcgatgaagaccacctcggcgacatggacttcaaggtggccggttccgcgaatggc
gtgaccgcgctccagatggacatcaagatcacgggcatcacgaccgagattatgaagatc
gcgctggagcaggcccacgaaggccgcctgcacatcctcggcgaaatgtcgaaggcgctc
aacgccgctcgcggcgagctcggcgaattcgccccgcgcatcgagacgatcaccatcccg
accgacaagatccgcgaagtgatcggctcgggcggctcggtcatccgctccatcgtggaa
gagtccggcgcgaagatcgacatctccgacgacggcacggtgaagatcgcggccgcgaac
ctcagctcgatccaggacgcgatcaaccgcatcaagtccatcgcgtcagagccggaagtc
ggcgtgatctacaagggcaaggtcgtgaagatcgtggagttcggcgcgttcgtgaacttc
ttcggttcgcgcgacggcctcgttcacatctcgcagatggccgaacgccgtctgaagcac
gcgtccgaagtcgtcaaggacggccaggaagtgtacgtgaagtgcctcggcttcgacgag
cgcggcaaggtccgcctcaccatgaagggcatcgaccagaccgacggcaaggaagtcgcc
gccgccccggctgaacagcccgcaggctga
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integrated database retrieval system
