Rhodomicrobium vannielii: Rvan_0071
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Entry
Rvan_0071 CDS
T01353
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rva03016
]
Rvan_0071
Enzymes [BR:
rva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rvan_0071
Transfer RNA biogenesis [BR:
rva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rvan_0071
Prokaryotic type
Rvan_0071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADP69361
UniProt:
E3I507
LinkDB
All DBs
Position
complement(82080..83006)
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AA seq
308 aa
AA seq
DB search
MARRNKGNEINGWLILDKPQGLTSNQALSRLKRLFHPRKVGHAGTLDPLATGVLPIAFGE
ATKTVAHVVDCEKSYDFTIRWGIETDTDDAEGKPVRTSDARPTAEQVQAALPQFIGDIMQ
TPPCYSAIKVDGERAYDLARDGEVVELQPRQISVYELEIEETISPDLTRLFCDCGKGTYV
RSIARDLGRTLGCFGHIAALRRTSVGPFHEENAISLETLENLSNSADGFGALMGTIAPVE
TALDGIPALAVNGDDAARLKRGQSILIRGATAPILKGPIFATSRGVLIAIGEVERGEMHP
IRVFNIPA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgcaacaagggcaacgagattaacggctggctcattctcgacaagccgcaa
gggctgacgtcgaatcaggcgctgtcgcgcctgaaacgcctgttccacccgcggaaggtg
ggccatgccggcacgctcgatccgctggcgaccggcgtactgcccatcgcgttcggcgag
gcgacgaagacggtcgcgcatgtggtcgattgcgagaagtcctacgacttcaccatccgc
tggggcatcgagaccgacaccgacgacgcggaaggcaagcccgtccgcacgagcgacgcg
cgcccaactgcggaacaggtgcaggctgcgctgccgcagttcatcggcgacatcatgcag
acgccgccctgctattccgcgatcaaggtcgacggcgagcgcgcgtacgacctcgcccgc
gacggcgaagtggtggaacttcagccacggcagatttccgtctacgagcttgagatcgag
gagacgatttcgcccgatctgacgcgcctgttctgcgactgcggcaagggcacttatgtg
cgctccatcgcgcgcgatctcggccgtacgctcggatgcttcgggcatatcgcggcgctc
cggcgcacgagcgtcggccctttccatgaagagaatgcgatttcgctggaaacgctcgaa
aacctgagcaatagtgccgacggcttcggtgctctcatgggcacgatcgctcctgtcgag
acggcgctggacggcatcccggcgctcgccgtgaacggagacgatgcggccaggctgaag
cgggggcagtccatcctcatcagaggggcgacggcaccaatcctgaaaggcccgatcttt
gcgacctcgcgcggggttctcatcgccattggcgaggtggaacgcggcgaaatgcatccg
atccgggttttcaacatccccgcataa
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integrated database retrieval system
