Rhodomicrobium vannielii: Rvan_0100
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Entry
Rvan_0100 CDS
T01353
Name
(GenBank) acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00300
Lysine biosynthesis
rva01100
Metabolic pathways
rva01120
Microbial metabolism in diverse environments
rva01230
Biosynthesis of amino acids
Module
rva_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rvan_0100
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rva01002
]
Rvan_0100
Enzymes [BR:
rva01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Rvan_0100
Peptidases and inhibitors [BR:
rva01002
]
Metallo peptidases
Family M20
Rvan_0100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ADP69390
UniProt:
E3I536
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All DBs
Position
114064..115182
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AA seq
372 aa
AA seq
DB search
MISAIHLTQELIRFDTVNPPGNEAPCARYLGGILDAAGFSIKHPSIGDNRENLIAVIGGT
SEKRPICFSGHTDVVPLGAAPWTVEPFGGELAFGRVHGRGSSDMKGGVAAFVAAAVKLAP
RLEGTPGLVLVITAGEERGCEGSNHMKKHGLLPPAGAIVIGEPTANRPLAGHKGVFWLEG
VAKGVTAHGSMPEQGVNAVYKAARAALALEAFDFSGDSHPVLGRPTVNVGWLKGGMNINS
VPDEARLGLDVRIVPGLDRKELVERFTRAAGGCVSFHVMSTADPVWTDPNDPWMADVIHV
VGDVTGNEPTFGGAPYFTDAGALKPGMGNPPVVILGPGEPEQAHQTDEWCSVQRIEEAEA
IYTDLIVRWCGL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgccatccacctcacgcaagagctgatccgcttcgacaccgtcaacccgccg
gggaacgaagccccatgcgcgcgctatctcggcggcatcctcgacgcggcgggcttctcg
atcaagcacccgagcatcggcgacaaccgcgagaacctcatcgcggtcatcggcggcacc
tccgagaagcggccgatctgtttttcgggccataccgatgtcgtgccgctcggcgccgcg
ccgtggacggtcgagccgttcggcggcgagctggctttcgggcgcgtccatgggcgcggg
tccagtgacatgaagggtggcgtcgcggcttttgtcgcggcggccgtcaagctcgcgcct
cggctcgaaggcacgcccggcctcgtgcttgtcatcacggcgggcgaggagcgcggctgc
gaaggctcgaaccatatgaagaagcacgggctgctgccgcccgctggcgcgatcgtcatc
ggcgagccaacagctaaccgcccgcttgccgggcacaagggcgtgttctggctcgaaggc
gtggcgaagggcgtcacggcgcacggctccatgcccgagcagggcgtgaacgcggtctac
aaggcggcgcgcgctgcgttggcgctcgaagcgttcgacttttcaggcgactcgcatccg
gtgctcggccgcccgacggtgaatgtcggctggctcaagggcggcatgaatataaactcg
gtgccggacgaggcgcggctcggcctcgacgtgcgcatcgtgcccggcctcgaccgcaag
gaactcgtggagcgcttcacgcgtgcggcgggtggctgcgtgtcgttccacgtcatgagc
acggcggacccggtgtggaccgatccgaacgacccgtggatggcggacgtcattcatgtg
gtgggcgacgtgacgggcaatgaaccgacattcggcggcgcgccgtatttcacggacgcg
ggcgcgcttaagcccggcatgggcaacccgccggtcgtcatcctcggccccggcgagccg
gaacaggcgcaccagaccgacgaatggtgctccgtccagcgcatcgaggaggccgaggcg
atttacaccgacctcatcgtgcgctggtgcgggctttag
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