Rhodomicrobium vannielii: Rvan_0248
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Entry
Rvan_0248 CDS
T01353
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rva03009
]
Rvan_0248
Enzymes [BR:
rva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Rvan_0248
Ribosome biogenesis [BR:
rva03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rvan_0248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADP69538
UniProt:
E3I6H7
LinkDB
All DBs
Position
290434..292836
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AA seq
800 aa
AA seq
DB search
MIGEKRVSVNGSIIESAALDVSPTDRVAVDGHPLPAREPPRLWRYHKPKGRVTTHKDPEG
RPTVFEALPDNLPRLISIGRLDFNTEGLLLLTNDGELARHMELPSTGWARRYRVRAFGEI
DQASLDKLKNGVRIAGVNYGPVEASLERETGDNVWITLLIREGKNREVRRIMEHLGLTVN
RLIRISFGPFMLGDLEPGQVEEVKTSVLKDQLGPRLARSLGVRREVVREEKRLSTPSRGK
PTYLRRKEAEPERPRRAFEEPQMRRRRVLSEDASEAPIVELVPVPKPPRADRGERGEKRD
FAPRDRGERSFDRPRDDAGGERRSFGRREDSGGERPAFPSRADGDRAPRSARDGDGGERK
PYPKRREGEGEGERRFNPRDAGDRPAFRKREGDRAERPSRAGGGERPPFQRRESDAGAEH
GGDAPKRTWAPRIDATTEDHSTPRFKRREEGGEGRPSRPSDARGERRPFNRDARPEGRFD
RKPRDGDAGGERRPFVRREDGAERPAFRSRSDGDRPAFRSRSDGDRPARFARDGEGGERK
SSTARPGFRSRDAGEGRADNRSAEGSGERRSFRPREGGGERKSFGPRDGADRPPFRKREG
DRTDRPSRAAGEDRPRFRRSEDGGDSARGPRPDRAPGDRPAYRSRSNEGGAGGERKSFDK
PFRERREGAGDRAPQREGERQASGAPFEKRGGAGGARTYGKKPFGSRDGAKSFSGRGGSG
AGTGDKPFGARPSGAAGRDRSGGEGGEGKPFGARKTFGTRGGKPGGGAGGGKFGKPSTRR
DGPSKPRTGGGPRKPRGDKA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
ttgattggggaaaagcgggtttccgtcaacggctcgatcattgaaagcgccgcgctggac
gtttctcccaccgaccgagtcgccgtagatggccatccgctgcccgcgcgcgagccgcca
cgcctgtggcgctatcacaagccgaagggtcgcgtgacgacccataaagaccccgaaggc
cgcccgactgtattcgaggcgctgcccgacaacctgccgcgtctcatctccatcggccgg
ctcgacttcaacaccgaagggctgctgctcctcacgaacgacggcgagcttgcacgccat
atggaactgccatcgaccggctgggcgcggcgctatcgcgtgcgcgcgttcggcgagatc
gatcaggcgtcgctcgacaagctgaaaaacggcgtgaggatcgcgggcgtcaattacggc
ccggtggaagcctcgctcgaacgcgagaccggcgacaacgtctggatcacgcttctgatc
cgcgagggcaagaaccgcgaagtgcgccgaatcatggagcaccttggcctcaccgtgaac
cggctcattcgcatctcgttcggcccgttcatgctcggcgatctggagccggggcaggtc
gaggaggtgaagacgagcgtcctgaaggaccagctcgggccgcgcctcgcgcgttcgctc
ggcgtgcgccgcgaagtcgtgcgcgaggaaaagcgcctttcgacgccatcgcgtggcaag
ccgacttatctgcgccgcaaggaagctgaacccgagcggccacgccgcgccttcgaggag
ccgcagatgcggcgtcggcgcgtgctgtccgaggatgcctcggaagcgccgatcgtggaa
ctggtgccggtgccgaagccgccgcgcgcggatcgcggcgagcggggagaaaagcgcgat
tttgcgccgcgtgatcgtggcgaacggagtttcgacaggccgcgcgacgacgcgggcggc
gagcggcggtcattcgggcgtcgcgaggacagcggcggggagcgcccggcgttccccagc
cgcgccgatggcgaccgcgcgccgcgttccgcgagagacggcgatggcggcgagcgcaaa
ccctatccgaagcgccgcgaaggggaaggtgagggcgaacgacgctttaatccccgtgat
gcaggcgaccgtccggctttccgcaaacgcgagggcgaccgcgcggagcggccttcacgc
gcgggcggcggcgagcgtccgcccttccagcggcgtgagtcggacgctggcgcggaacac
ggcggcgatgcgccgaagcggacatgggcgccccggatcgacgccacgacagaagatcac
tcgacgccgcgtttcaaaaggcgcgaggaaggcggcgagggtaggccgtcgcggccgagc
gatgcgcggggtgagcgccgtccgttcaaccgcgatgcgcgccccgagggccgcttcgat
cgcaagccgcgcgacggcgatgcgggcggcgaacgtcggccttttgtgcgccgcgaggat
ggtgcggagcgcccggcgttccgcagccgcagcgatggcgaccgccctgcgttccgcagc
cgcagcgatggcgaccgccccgcgcgtttcgcgagggatggcgaaggcggcgagcgcaag
agttcgacggcgaggccaggtttccgttcccgcgatgcgggcgagggccgtgccgacaac
aggtcggccgagggatcgggagaacgcagaagcttccgtccgcgcgagggtggcggcgag
cgcaagagtttcggtccccgcgacggggctgaccgcccgccgttccgcaaacgcgaaggg
gaccgcactgaccggccttcgcgcgcggcgggtgaggatcggccgcgctttcgcaggtcg
gaagacggcggcgatagcgcgcgtgggccacggcccgaccgagcacccggcgaccgtccg
gcataccggagccgcagcaacgaaggcggcgcaggtggcgaacgcaagagcttcgacaag
ccgttccgcgagcgacgggaaggtgccggcgatcgtgccccgcaacgtgagggcgagcgc
caggcaagcggtgcgccgttcgagaagcgtggcggtgcgggcggcgcgcggacgtatggg
aaaaagccgttcggttcgcgcgacggtgcgaaatcgttttccggtcgcggcggtagcggc
gcaggcacgggcgacaagcctttcggcgcgcgtccaagcggcgcggcgggccgtgatcgc
agcggtggcgaaggcggcgagggcaaacctttcggcgcacgcaagacgttcggcacgcgc
ggcggcaaaccgggcggaggcgcgggcggcggcaaatttggcaagccctccacccggcgc
gatggcccgtccaagccgcgcacgggcggtggcccccgcaagccgcgcggcgacaaggcg
tga
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