Rhodomicrobium vannielii: Rvan_0509
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Entry
Rvan_0509 CDS
T01353
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
rva
Rhodomicrobium vannielii
Pathway
rva02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rvan_0509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rva03000
]
Rvan_0509
Transcription factors [BR:
rva03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rvan_0509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
AAA
GAF_3
AAA_2
Mg_chelatase
AAA_3
IstB_IS21
HTH_28
nSTAND3
HTH_50
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADP69791
UniProt:
E3HYQ0
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All DBs
Position
585035..586648
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AA seq
537 aa
AA seq
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MPIQRSVSVELDDISDDFTHCFTGECRVNVLPILYQISEIINDSEDLASSLSIILNVMQQ
RLKIVRAMVTLYDRQSETIFIHASFGLTDEQKAKGIYSPGEGITGKVVEAGKPIIIPKLR
DNPGSANQTISGDGVNGNTSFFCVPIVHSKRVLGTISAERVYINRRLLKQDVELLATIAS
IIAPAVELYLLENVDKVRLEAENKRLNAELKERFKPSNIIGNSKPMKDVYSLIHKVAFTK
ATVLILGESGVGKELVANAIHYNSITADGPFIKFNCAALPENIVESELFGHEKGSFTGAI
AMRKGRFEMAHGGSIFLDEVGELSLSMQAKLLRVLQEKTFERVGGMKPVNVDVRIIAATN
RNLLDMVDKGTFREDLYYRLNVFPITIPPLRDRSSDIILLADYFVTKYAAETGKDVTRIS
TPALNMLIAYHWPGNVRELENVIERSVILAEDGVIHGYNLPPSLQTPETTPGAPSGMTIE
AKLQAVEYEMIVEALKAHHGNMTEAARELGLTRRMLGLRMEKYAINYKQFRRKEAAA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccaacgctcggtctctgtcgaacttgacgacatttccgatgatttcacgcat
tgttttacgggcgaatgccgcgtcaacgtgctgccgatcctttatcagatcagcgaaatc
attaacgacagcgaagatctcgcaagctcgctttccatcatcctgaatgtgatgcagcag
cgcctgaagatcgttcgcgccatggtgacgctctatgaccgccagtccgaaacgatcttc
attcacgcgagcttcggcctgacggacgaacagaaggcgaagggcatctattcgccgggc
gagggcataaccggcaaggtggtggaggcgggaaagccgatcatcatcccgaagcttcgc
gacaaccccggctcggccaatcaaacgatcagcggcgacggcgtgaacgggaacacttcg
ttcttttgcgtaccaatcgttcattcgaagcgcgtgctcggaacgatcagcgccgagcgc
gtctatatcaatcgtcggcttctgaagcaggatgtggagcttctcgcgacgattgcttcg
atcatcgcgcccgccgtagagctttacctcctcgaaaacgtggacaaggtgaggctcgaa
gccgaaaacaagcgcctcaacgcggaactgaaggagcgcttcaagccatccaacatcatc
ggaaattcaaagccgatgaaggacgtgtacagcctcattcacaaggttgccttcaccaaa
gctaccgtgctcatcctcggtgaaagcggcgtgggcaaggaactcgtcgcgaacgcgatc
cactataacagcatcacagcggacggcccgttcatcaagttcaactgcgcggcgctgcct
gaaaacatcgtcgaaagcgagttgttcggccacgagaaaggctcgttcactggcgccatc
gcaatgcgcaagggccgcttcgagatggcgcatggcggcagcatcttcctcgatgaggtg
ggagagctttcgctgtccatgcaggcaaagcttttgcgcgtgcttcaggagaagacgttc
gaacgcgtcggcggcatgaagccggtgaatgtggatgtccgcatcatcgctgccacgaat
cgcaaccttctggacatggtggacaaaggcacgttccgcgaagacctctattaccggctg
aacgtgttcccgattaccatcccgccactgcgcgaccggtcgagcgatatcatcctgctc
gcggattatttcgtgacgaagtacgcggccgagacgggcaaggacgtgacgcggatttcc
acgcccgcgctgaacatgctcattgcctatcattggccgggcaatgtccgcgagttggaa
aatgtcatcgagcgctcggtgatcctcgcggaggatggcgtcattcacggttacaatctg
ccgccgtcgcttcagacgcccgaaactacgcccggcgcaccgtcgggcatgacgattgaa
gccaagcttcaagccgttgaatacgaaatgatcgtggaggcgctgaaagcgcaccatggc
aatatgaccgaagcggcaagggagcttggcctgacccggcgcatgctcgggcttcgcatg
gaaaaatacgccatcaactacaaacagttccgtcgtaaagaggcagcagcatga
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