Rhodomicrobium vannielii: Rvan_0558
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Entry
Rvan_0558 CDS
T01353
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00071
Fatty acid degradation
rva00280
Valine, leucine and isoleucine degradation
rva00310
Lysine degradation
rva00362
Benzoate degradation
rva00380
Tryptophan metabolism
rva00410
beta-Alanine metabolism
rva00640
Propanoate metabolism
rva00650
Butanoate metabolism
rva00907
Pinene, camphor and geraniol degradation
rva00930
Caprolactam degradation
rva01100
Metabolic pathways
rva01110
Biosynthesis of secondary metabolites
rva01120
Microbial metabolism in diverse environments
rva01200
Carbon metabolism
rva01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Rvan_0558
00650 Butanoate metabolism
Rvan_0558
09103 Lipid metabolism
00071 Fatty acid degradation
Rvan_0558
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rvan_0558
00310 Lysine degradation
Rvan_0558
00380 Tryptophan metabolism
Rvan_0558
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rvan_0558
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rvan_0558
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rvan_0558
00930 Caprolactam degradation
Rvan_0558
Enzymes [BR:
rva01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rvan_0558
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Rvan_0558
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Rvan_0558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_Gly3P_dh_N
DAO
NAD_binding_2
F420_oxidored
NAD_binding_8
2-Hacid_dh_C
UDPG_MGDP_dh_N
Acetyltransf_CG
ApbA
AlaDh_PNT_C
DFP
RS_preATP-grasp-like
Shikimate_DH
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ADP69839
UniProt:
E3HZ93
LinkDB
All DBs
Position
631870..634044
Genome browser
AA seq
724 aa
AA seq
DB search
MSSISYQVDADGIATLTIDQPGKSMNVISPEFTEELSEAIERAAADSSVKGIVITSGKSS
FVAGADLIGMSGMIEHARNAPAAEALKVSSRLTEVLRRLETIGKPVATAINGTALGGGFE
IALATHYRVAADDESIKIGQPEVQVGLLPGAGGTQRIPRLIGIMASAPLLLEGKHLSPQQ
AKSSGLIHDVVPAAELLAKAKAWLLSPQAKSVQPWDERGFKVPGGAGGMHPAAAQLFMAA
NAMTRDKTLGNYPAAQAILSAVYEGTQVPIDLGLKIEAKYFLSLLRGPVAPAMIRTLFVN
KGRADKLVRRPQGVPKAKFKKIGMLGAGMMGAAIAYVAASNGIEVVLLDRDVEAAERGKG
YARKLVEKAVSRRKTTEADGQGLLARIHATADYADLADVDYIIEAVFEDRAIKADVTKKV
EAVIRPDVIFGSNTSTIPITSLAEASERPEKFIGIHFFSPAEKMPLVEIIRGKKTSDEAL
AVTLDFVQAIRKTPIVVNDGRGFFTSRFCMNYIGEGEIMLTEGIPAALVENAGKLAGMPV
GPLALADETAIDLGWKIHKAAETDLGDAYTPSAAIGVMEAMYVKNGRAGRKNGKGFYEYP
EGGPKTLWAGLADLFPVKPESEWPSIDDLKKRLLFAQALDAVRTMEDGVLTDPEDGDVGG
IFGLGFAPYTGGPLSMLDGIGIANAVAECERLAARYGERFSPPKLLRDMAAEGRTFYPAA
KAAA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatctcctatcaagtcgacgcggacggcatcgccacgctcaccatcgaccag
ccgggcaagtcgatgaacgtcatcagccctgaattcaccgaggaactcagcgaggccatc
gagcgcgccgccgccgattcgagcgtgaagggcatcgtcatcacctccggcaagtcgagc
ttcgtcgcaggcgcggaccttatcggcatgtcgggcatgatcgagcacgcgcgcaatgct
ccggccgcggaggcgctgaaggtctcgtcgcgtctcaccgaagtgctgcgccgcctcgaa
accatcggcaagccggtcgcgaccgcgatcaacggcacggcgctcggcggcggcttcgag
atcgcgctagccacgcattaccgcgtcgcggcggatgacgagtccatcaagatcggccag
cccgaggtgcaggtcggcctgctgccgggcgcgggcggcacgcagcgcattcctcgcctc
atcggcatcatggcgtccgcgccgctgctgctcgaaggcaagcacctgtctcctcagcaa
gcgaagtcgtccggtctcatccacgatgtcgtgcccgcggctgagcttctcgcaaaggcg
aaggcgtggcttctgtccccgcaggcgaaatcagtccagccgtgggacgagcgcggcttc
aaggtgccgggcggcgcgggcggcatgcatcccgctgcggcgcagcttttcatggccgcc
aacgccatgacgcgcgacaagacgctcggcaattatccggccgcgcaggcgatcctctcg
gcggtttatgaaggcacgcaggtgccgatcgacctcggcctcaagatcgaggcgaaatat
ttcctctcgctgctgcgcggccccgtcgcgcccgcgatgatccgcacgctgttcgtcaac
aagggccgggcggacaagctcgtgcgccgtccgcagggcgtgccgaaggcgaagttcaag
aagatcggcatgctgggcgcaggcatgatgggcgcggccatcgcctatgtcgcggcgtcg
aacggtatcgaggtggtgcttctcgatcgcgacgtggaagcggccgagcggggcaagggc
tacgcgcggaagctcgtggagaaggccgtttcgcgccgcaagacgacggaggcggacggg
caggggttgctggctcgcatccacgccacggccgattacgccgacctcgctgatgtcgat
tacatcatcgaggccgttttcgaggatcgcgccatcaaggccgacgtgacgaaaaaggtc
gaagccgtgatccggcccgacgtgatcttcggctcgaacacgtccaccatcccgatcacc
agcctcgcggaagcgagcgagcggcctgagaagttcatcggcatccacttcttttcgccc
gccgagaagatgccgcttgtcgagatcatccgcggcaagaaaacaagcgacgaggcgctg
gcggtcacgctggactttgtgcaggcgatcaggaagacgcccatcgtcgtcaatgacggg
cgcggcttcttcacctcgcgcttctgcatgaactacatcggcgagggcgagatcatgctg
acggaaggcattccggcggcgctggtcgagaatgcgggcaagcttgcgggcatgccggtc
gggccgctcgcgctcgcggacgagacggccatcgacctcggctggaagatccacaaggcg
gccgaaaccgacctcggcgacgcctatacgccgagcgccgccatcggcgtgatggaagcc
atgtacgtcaagaacgggcgcgcgggccgcaagaatggcaagggcttctacgagtatccc
gagggcgggccgaagacgctttgggcgggtctcgcggaccttttcccggtgaagcccgaa
agcgagtggccgagcatcgacgacctcaagaagcggctcctcttcgcgcaggcgctcgac
gcggtgcggaccatggaagacggcgtgctcaccgacccggaagacggcgatgtgggcggc
atcttcggcctcggcttcgcgccctacaccggcgggccgctgtcgatgctcgacggtatc
ggcatcgcgaatgccgtcgcggagtgcgagcggctcgccgcgagatatggcgagcggttc
tcgccgccgaagctgttgcgcgacatggcggcggaagggcggacgttctacccggcggcg
aaggctgctgcttag
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