Rhodomicrobium vannielii: Rvan_0873
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Entry
Rvan_0873 CDS
T01353
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00061
Fatty acid biosynthesis
rva00071
Fatty acid degradation
rva01100
Metabolic pathways
rva01212
Fatty acid metabolism
rva02024
Quorum sensing
rva04146
Peroxisome
Module
rva_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rvan_0873
00071 Fatty acid degradation
Rvan_0873
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rvan_0873
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rvan_0873
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rva01004
]
Rvan_0873
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rva04147
]
Rvan_0873
Enzymes [BR:
rva01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rvan_0873
Lipid biosynthesis proteins [BR:
rva01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rvan_0873
Exosome [BR:
rva04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rvan_0873
Exosomal proteins of breast cancer cells
Rvan_0873
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADP70149
UniProt:
E3I1T0
LinkDB
All DBs
Position
970179..971930
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AA seq
583 aa
AA seq
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METGMDGHQNPQILETNDNDTQAGTAATTYPWLRSYPAGVDWFQVFEPKALPVALEETVA
RFPDKPASWFFGKTMTYAELGAAVDRATKALQGLGVREGTRVGLLFPNCPAFVIFYYATL
KAGGTVVSLNPLYTVPELAYQVKDAGAKIVVTADLAATLPKAKALVDNGTLDTVIVTPFK
KMLPGLKGFLFGLFKGKDLATWTPGRGLLSAEELLDNDGHYDRSAIDVNAVAALQYTGGT
TGTPKGAMLTHSNLSINVQQAAAWFPGLAIPGEERFFCVIPFFHSFAMTGLMNFAILKGA
QMIMLPRFELKLALKTIDQTKPTIMAGVPTLFNAMAKVPDIKKHDLSSLKFCISGGAALP
LEVRRDFESVSGCGLVEGYGLSETSPVTHINPLTGPKKECSIGLPVPGTEMSLRKLGDPQ
EEVPLGEKGEICIRGPQVMKGYWNKPKETADTFVGEFFRTGDVAYMDEDGFTYIVDRIKD
LIICSGFNVYPRRIEEAIYEHPAVDEVTVIGVPDKYRGEAPKAFVKLREGQQVTKEEMLD
FLKERISKIELPADIEFRAELPKTLIGKLSKKELKAEEVAKPH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggcatggacggtcatcagaatccgcagattttggaaacgaacgacaacgac
actcaagccggaacggcggcgaccacctatccatggctgagatcatatccggcgggagtt
gactggtttcaggtcttcgagccgaaggcgctgcccgtcgcgctcgaagagacagtggcg
cgcttccccgacaagcccgcgtcatggttcttcggcaagacgatgacctatgccgaactc
ggcgcggctgtggaccgcgcgacgaaggcgctgcaaggtctcggcgtgcgcgaaggcacg
cgcgtgggcctgttgttcccgaactgtccggccttcgtcatcttctattatgcgacgctg
aaggcgggcggcactgttgtcagcctcaatccgctttataccgtgccggaactcgcctac
caggtgaaggacgcgggcgcaaaaatcgtggtgacggcggatctcgcggccacgcttccg
aaggcgaaggcgctggtcgataacggcacgctcgatactgtcattgtcacgccgttcaag
aagatgctgccggggctgaagggcttcctcttcggcctgttcaagggcaaggatcttgcg
acgtggacgccgggcaggggcctccttagcgcggaggagctgctcgacaatgacggccat
tacgaccgcagcgcgatcgacgtgaacgctgtggcggcgctgcaatatacgggcggcacg
acgggcaccccgaaaggcgcgatgctcacgcattcgaacctctccatcaacgtgcagcag
gcggcggcgtggtttccggggctcgccatccccggcgaggagcgctttttctgcgtgatc
ccgtttttccactccttcgcaatgaccggcctgatgaacttcgcgatcctcaagggcgcg
cagatgatcatgctgccgcgcttcgagttgaagctcgcgctgaagaccatcgaccagacg
aagcccaccatcatggcgggcgtgccgacgctgttcaacgccatggcgaaggtgccggac
atcaagaagcacgatttgtcctcgctgaagttctgcatttcgggcggcgcggcgctgcct
ctcgaagtgcggcgcgatttcgagagcgtctccggctgcggtctggtcgaaggctacggc
ctgtcggagacgtcccccgtcacgcatatcaatccgctgaccggcccgaagaaggaatgc
tccatagggctgcctgtgccgggcacggagatgtcgctccgaaagctcggcgatccgcag
gaggaagtgccgctcggtgagaagggcgaaatctgcattcgcggcccgcaggtgatgaag
ggctactggaacaagccgaaggagacggccgacactttcgtcggcgagttcttccgcacc
ggcgacgtggcctacatggacgaggacggcttcacctacatcgtcgaccgcatcaaggat
ctgatcatctgctcgggcttcaatgtctatccgaggcgcatcgaggaggcgatctacgag
catcccgcggtggacgaggtgaccgtgatcggcgtgccggacaaatatcgcggtgaagcg
ccgaaggcgttcgtgaaactgcgcgaaggccagcaggtgacgaaggaggagatgctcgat
ttcctgaaagagcgcatctcgaagatcgagctgccggccgatatcgagtttcgcgccgaa
ctgccgaagacgctgatcggcaagctttcgaagaaggaactgaaggcggaggaggtcgcg
aagccgcattga
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