Rhodomicrobium vannielii: Rvan_0910
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Entry
Rvan_0910 CDS
T01353
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rva03032
]
Rvan_0910
03036 Chromosome and associated proteins [BR:
rva03036
]
Rvan_0910
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_0910
DNA replication proteins [BR:
rva03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rvan_0910
Chromosome and associated proteins [BR:
rva03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Rvan_0910
DNA repair and recombination proteins [BR:
rva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Rvan_0910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ADP70186
UniProt:
E3I1W7
LinkDB
All DBs
Position
complement(1014729..1015061)
Genome browser
AA seq
110 aa
AA seq
DB search
MIKSELIEKLAATNPHLMHRDVEKIVNVIFEEITGALTKGDRVELRGFGAFSVKHRPARV
GRNPRTGDQVSVPEKFVPYFKTGKELRIRLNPPEAPAEKPKGRKKAAKAS
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtccgagctgattgagaaacttgccgcgacgaaccctcatctcatgcaccgg
gatgtggagaagatcgtgaatgtgattttcgaagagattactggcgcgctgaccaagggc
gaccgtgtcgagctgcgcggctttggcgcattttccgtcaagcaccgccccgctagggtc
ggccgtaacccgaggacaggggatcaggtttccgtgcctgaaaagttcgtcccctatttc
aagacaggcaaagagctgagaatcaggcttaatccgcccgaggctcctgccgagaagccg
aaaggccgcaagaaggcagcgaaggcatcctaa
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