KEGG   Rhodomicrobium vannielii: Rvan_1074
Entry
Rvan_1074         CDS       T01353                                 
Name
(GenBank) CagE, TrbE, VirB component of type IV transporter system, conserved region
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
rva  Rhodomicrobium vannielii
Pathway
rva02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rva00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rvan_1074
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rva02044]
    Rvan_1074
Enzymes [BR:rva01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Rvan_1074
Secretion system [BR:rva02044]
 Type IV secretion system
  Trb secretion system protein
   Rvan_1074
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG DUF87 AAA_22 ABC_tran AAA_29 AAA_10 AAA_23 AAA_16 TrwB_AAD_bind AAA_28 Phosphonate-bd FtsK_SpoIIIE nSTAND3 RuvB_N
Other DBs
NCBI-ProteinID: ADP70347
UniProt: E3I3K0
LinkDB
Position
complement(1190924..1193428)
AA seq 834 aa
MLRLKQFRDRAKGTADLLNYASLIGDGLVLCKDGSLLAGFLYRGPDSQSATPAELNSVTS
RINASLARLGSGFALWIDAVRLPAAAYPETDASHFPDPITAAIDAERRRQFLSEGAHFET
EYALLIAYTPPLRRTTKIADLIYDDDPKSEPESPGDRQIKIFERVLRDLEDGLSDILRLR
RMKAYRVSDESGRSHLQDELINYVSFAVTGHLSPLNVPPCPMYCDAWLGGQELYGGDTPK
MGDHFIAAVAIEGFPAESCPNMLARLETLAIAFRFSSRFIPLDAHESLGLLRAYRRKWRQ
WMRGFFAQVFRTEGGVVNEDAALMAAQAENAITDASSNLVAFGYYTPVLILMGENRDALL
DEARLIARELRREGFASRVETVNTLEAFLGSLPAHAVPNVRRPLLHSLNLADLMPASSIW
PGLPVCPSPLFPEGSPPLLYGATTGSTPFRLNLHVGDVGHTLIFGPTGAGKSTLLALIAA
QFRRYRHARITVFDKGRSLFALAHAAGAQHYDLAGDTGSPGLCPLGRLETALDVAFAEDW
LATCYELQQGGAPTPRQKEEIHRAVRLMRETKSGEGRSLTDFIATVQDKDIRAALGTYTI
EGALGHLLDARSDGIEAASFTVFEIEELMALGEKNLIPVLLYLFRHFERSLTGAPALLLL
DEAWVMLGHPVFREKIREWLKVLRKANCAVVLATQSLSDAARSGILDVLLESCPTRILLP
NEEADKGGANGIAGPLDLYRLIGLNETEIALLKSAVKKRHYYYTSPEGRRLFELGLGPVA
LAFTAVSSREDVARVRALIEAHGRDWPRAWLAERGLDTKDIFGATEEGSHEEAA
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgctgcgcctgaaacagttccgcgatcgcgccaaaggcaccgccgatcttctgaattat
gcgagcctcatcggcgatggccttgtgctctgcaaggacggctcgctcctggccggcttc
ctctaccgcggccccgacagccaaagcgcaacgcccgccgagctcaactctgtgacaagc
cgcatcaatgcgagcctcgcgaggctcggcagcggttttgcgctctggatcgacgccgtg
cgccttccagccgccgcttacccggagaccgacgcctcgcattttccggacccgatcacg
gctgccatcgatgccgagcggcgccgccagttcctgagcgaaggcgctcatttcgagacg
gaatacgcgcttctcatcgcctacacgccgccgcttcgccgcaccaccaagatcgccgat
ctcatttacgacgacgatccgaagagcgagcccgaaagccccggcgaccgtcagatcaag
atcttcgagcgcgtgcttcgcgatctcgaagacggcctgtcggatatcttgcggttacgg
cgcatgaaggcctaccgcgtgagcgatgaaagcgggcgttcgcatctgcaggacgaactc
atcaattatgtgagcttcgcggtcacggggcatctcagccccctcaacgtgccgccatgc
ccgatgtattgcgatgcctggctcggtggccaggagctttatggcggcgataccccgaaa
atgggcgatcacttcatcgcggccgtagccatcgaaggcttcccggccgaatcctgtccc
aacatgctggcacggctcgagacgctcgcgatcgcgtttcgcttttcctcgcgcttcatc
ccgctcgacgcccatgaaagcctcgggctccttcgcgcctaccggcgcaaatggcggcaa
tggatgcgggggttctttgcgcaagtgttccgcacggaaggcggcgtcgtgaatgaggat
gccgctctgatggcggcgcaggccgagaacgccatcaccgacgccagctccaacctcgtc
gcctttggctattacacgccggtcctcatcttgatgggcgagaacagggacgcgcttctc
gatgaggcgcgcctaatagcccgcgagcttcggcgcgaaggttttgcgagccgcgtcgag
acggtaaacacgctcgaggcctttctcggcagcctgccggcgcatgccgtcccgaatgtg
aggcggccgcttctccacagtttgaacctcgccgaccttatgcccgcgtcgtccatttgg
ccgggacttcccgtctgcccgagcccgcttttcccggaaggctcgccgccgctcctttac
ggcgccaccaccggctcgacgccattccggctcaatctgcatgtgggcgatgtcggccat
acgctgatcttcgggccgaccggcgccggcaagtcgacgctgctcgcactcatcgccgcg
cagttccgccgctaccggcatgcccgcatcacggtctttgacaagggtcgttcgcttttc
gctctcgctcatgcggccggcgcgcagcactatgatctggcgggcgatacgggaagcccg
ggcctgtgtccgctcggcagactcgagacggctctagatgtggcgttcgccgaagactgg
cttgccacctgctacgagcttcaacagggaggcgcgcccacaccgcggcagaaagaagaa
atccatcgcgccgtgcggctgatgcgcgaaaccaaaagcggcgagggccgaagcctcacc
gactttatcgctaccgttcaggacaaggacatccgggcggcgcttggcacctatacgatc
gaaggcgcgctcggccatcttctcgatgcccggtccgacggcatcgaagcggcctcgttc
acggtcttcgagatcgaggaactgatggcgctcggcgagaagaacctgatcccggtgctt
ctctatctgtttcgccatttcgagcgctcgctcacgggcgcgccagcccttctcctcctc
gatgaggcttgggtgatgctcggccatcccgtcttccgggaaaagatccgcgaatggctg
aaagtgctgcgcaaggccaattgcgcggtggtgctggcaacccagagcctttcggacgcg
gcgcgctccggcatcctcgatgttctcctcgaatcctgcccgaccaggatccttttgccg
aacgaggaagcggacaagggcggggcgaacggcatcgctggtcccctcgatctttaccgg
ttgatcggattgaacgagaccgaaatcgcgcttctgaaaagcgcggtcaaaaaacgccac
tactactatacgagcccggaaggccgcaggctgttcgagctcggacttggtcccgtggcc
ctggctttcaccgccgtctcatcccgtgaagacgtggcccgcgtgcgcgcgctcatcgag
gcccacggcagggactggccgcgagcctggctcgccgagcggggcctcgataccaaagac
attttcggagcaacggaggaaggtagccatgaagaagcagcttaa

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