Rhodomicrobium vannielii: Rvan_1120
Help
Entry
Rvan_1120 CDS
T01353
Name
(GenBank) transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
rva
Rhodomicrobium vannielii
Pathway
rva02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rvan_1120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rva03000
]
Rvan_1120
Transcription factors [BR:
rva03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rvan_1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA_2
GAF_3
Mg_chelatase
AAA
AAA_3
AAA_16
BrxC_BrxD
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADP70391
UniProt:
E3I3P4
LinkDB
All DBs
Position
complement(1232645..1234486)
Genome browser
AA seq
613 aa
AA seq
DB search
MTSSAPAGTVTVPGSVRYSDTALSGIYEISKIVTSPSSLRVMLNNVVSVMSSFLDMRLST
LMLLDKAGDPEIKVSASTEASIDSNEDGDLPLAVIDQIVATASPLVVQNCALHPSFAGWK
RLGSAGPNVVQTFIGVPIRVDAKVVGTLAIERVWQGSMDVRIDHDVRFLTMVANLVGQAL
KLHRVVAEDRERLIHEQHRLAKELSNIKAKAPPPKMTGILGKSRAIRAVTERIEQVAKSN
APVLIRGETGTGKELFARAIHELSRRKGKPFVKVNCAALPEGVIESELFGHEKGAFTGAV
GLRKGRFELADGGTIFLDEIGEISPSFQAKLLRILQEGEFERVGGQHTLKINFRLVCATN
RALEQMVADGKFRADLYYRINVVPLMLPPLRERQGDIPELAQHFLSRFAEENGYQLTFGP
DAMDVLCKCYFPGNIRELENCIRRTAAMTLGDEIHAADFACQHGHCLSSMLWKGPASGEV
TYMPPQQHRFTEGNSSQPRANPPSAPSPYTPPAPEPLEGRNGNGHAHGASNGNGATHNGA
SQNGTSHNGASHGNGSDAHEDADGGYAQLSKDTLINALEKTGWVQAKAARILGLTPRQVG
YALKKHGIEMKRY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttccgcaccggcgggcaccgtcacggttccgggaagcgtgagatacagcgac
acagcgctgagcggcatctacgagatctcgaagatcgtgacgtcgccctcaagcctgagg
gtgatgctcaacaacgtcgtctcggtcatgagttcgttcctcgatatgaggctctcgacg
ctcatgctgctggacaaggctggcgatcccgagatcaaggtgtcggcatcgacggaagcc
agcatcgactcaaacgaagatggcgatctgccgctcgccgtcatcgaccagatcgtggct
accgcctcgccgctggtggtgcagaactgcgcccttcacccgtcgttcgccggctggaag
cgcctaggcagcgccgggccgaatgtcgtgcagacgttcatcggcgtgccgatccgcgtc
gatgcgaaggtggttggtacgctcgccatcgaacgcgtgtggcaaggcagcatggatgtg
cgcatcgatcacgatgtgcgcttcctaaccatggtggcgaacctcgtcggccaggcgctg
aagctgcatcgcgtcgtcgccgaggaccgcgagcgcctcattcacgagcagcaccgcctc
gccaaggaactgtcgaacatcaaggccaaggcgccgccgccgaagatgacgggcatcctc
ggcaaaagccgcgcgatccgcgcggtcacggagcgcatcgaacaggtcgcgaagtccaac
gcgccggttctcattcgcggcgaaaccggcaccggcaaggagcttttcgcccgcgcgatc
cacgagctttcgcgccgcaagggtaagccgttcgtcaaggtgaactgcgcggcgctgccc
gaaggcgtcatcgagtccgaacttttcgggcacgagaagggtgcgttcacaggcgctgtc
ggccttcgcaagggccgcttcgaactggcggacgggggcacgatcttcctcgacgagatc
ggcgaaatctcgccctcgttccaggcaaagcttctccgcatccttcaggagggcgagttc
gagcgcgtcggcggccagcatacgctgaagatcaatttccgcctcgtctgcgccacgaac
cgcgcgctggaacagatggtcgccgatggcaaattccgcgccgacctctattaccgtatc
aacgtggtgccgctcatgctgccgccgttgcgcgagcggcaaggcgacatccccgaactc
gctcagcacttcctcagccgcttcgccgaagagaacggctatcagttgaccttcggcccg
gacgcgatggatgtgctgtgcaagtgctacttccccggcaatatccgcgaactggaaaac
tgcattcggcgcaccgccgcgatgacgcttggcgacgagatccacgccgccgattttgcc
tgtcagcacggacattgcctgtcgtcgatgctgtggaaaggcccggcgagcggggaggtg
acctatatgccgcctcagcagcatcgctttaccgagggcaacagcagtcagccgcgcgcg
aacccgccatccgctccatcgccctacacgccgcccgcgccggagccgttggaaggccgg
aacgggaacgggcacgcgcacggagcctcgaacggaaacggcgcgacgcataatggcgcc
tcgcaaaacggcacgtcgcataatggtgcttcgcacggaaacggcagcgatgcgcatgag
gatgccgatggcggctatgcgcaactcagcaaggacacgctgatcaacgcgttggaaaag
acaggctgggttcaggcgaaggccgcgcgcatcctcggcttgacgccgcgtcaggtcggt
tacgcgctcaaaaagcacggcatcgagatgaaacgctactga
DBGET
integrated database retrieval system
