Rhodomicrobium vannielii: Rvan_1177
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Entry
Rvan_1177 CDS
T01353
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rva03016
]
Rvan_1177
Enzymes [BR:
rva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Rvan_1177
Transfer RNA biogenesis [BR:
rva03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Rvan_1177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADP70447
UniProt:
E3I4D2
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All DBs
Position
1298556..1299965
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AA seq
469 aa
AA seq
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MQDACAPGIEQDARPTANAPEKRVFIKTFGCQMNVYDSERMADALGAAGFVETGAPEDAD
LVILNTCHIREKAAEKVFSELGRLRVLREARRQDGGGNLMIAVAGCVAQAEGEEIARRAA
VDIIVGPQSYHRLPELIERRASTRGPVIETEFPAAEKFASLPAPKLRAAPSAFLTVQEGC
DKFCTFCVVPYTRGAEYSRPVAQIIEEAKRLAERGVREITLLGQNVNAWAGEGPSGKTWT
LPDLLAALSEVNGIARLRFTTSHPNDMSDALIAAHRDLPKLMPYLHLPFQSGSDRILKAM
NRKHRMEDYLRIVHRLRDARPDLALSTDIIVGFPGETDADFEETMRMVERVHFAQAYSFK
YSPRPGTPAADRAAQVPEDVKSERLARLQALLFAQQTAFNAAMVGRTLSVLWESRGRNEG
QVVGRSPYLQPVYAEGDPALIGHIADVEIVAASQNSLRAVIKNLDVDAT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcttgcgcccccgggattgaacaagacgcgcggcccaccgctaacgcgccc
gaaaagcgcgtcttcatcaagacgttcggctgccagatgaatgtctacgacagcgagcgc
atggcagacgcgctgggcgcggccggtttcgtcgagacgggcgcgccggaagacgccgac
ctcgtcatcctcaacacgtgccatatccgcgagaaggccgccgaaaaggtattctcggaa
ctcggccgcctgcgcgtgctccgcgaggctcgccgccaggacggcggcggcaacctcatg
atcgcggtcgcgggttgcgttgcgcaggccgagggcgaggaaatcgcaaggcgcgcggcg
gttgacatcatcgtcggcccgcagagctatcatcgtctgcccgaactgatcgagcggcgg
gctagcacgcgcggaccggtcatcgagaccgaatttcccgccgccgaaaaattcgcaagc
ctgcccgcgccgaagcttcgcgccgcgccctcagccttcctcaccgtgcaggaaggctgc
gacaaattctgcactttctgcgtggtgccctatacgcgcggcgcggaatattcgcggccc
gtggcgcagatcatcgaggaagcgaagcgcctcgccgagcgcggcgtccgcgagatcacc
cttctcgggcagaatgtgaatgcgtgggccggggaaggcccgtcggggaagacatggacg
ctgccggacttgctggccgcgctgtccgaggtcaacggcatcgcgcgcctccgcttcacg
acaagccacccgaacgacatgagcgacgcgctcatcgccgcgcatcgcgacctgccgaag
ctgatgccttatctgcatctgccgttccagtccggctcggatcgcatcctgaaggcgatg
aaccgcaagcaccgcatggaggattacctccgcatcgtgcaccggctgcgtgacgcgcgc
cccgacctcgcgctgtcgaccgacatcatcgtcgggtttcccggcgagacggacgcggat
ttcgaggaaaccatgcgcatggtggaacgcgttcacttcgcgcaggcttattcattcaag
tacagcccgcgccccggaacacccgccgccgaccgcgccgcgcaggtgccggaagacgtg
aagtccgagcgtctcgcgcggcttcaggcgctgcttttcgcgcagcagaccgccttcaat
gccgcgatggtgggacggacgctttcggtgctgtgggaatcgcgcgggcgcaatgaagga
caggtcgtcggccgctcgccctaccttcagccggtgtacgcggagggcgacccggcgctg
atcggacacatcgccgatgtggaaatcgtggctgcaagccaaaatagtcttcgggctgtc
ataaaaaatctggacgttgacgctacataa
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