KEGG   Rhodomicrobium vannielii: Rvan_2098
Entry
Rvan_2098         CDS       T01353                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rva  Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:rva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rva03400]
    Rvan_2098
Enzymes [BR:rva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Rvan_2098
    5.6.2.6  RNA 3'-5' helicase
     Rvan_2098
DNA repair and recombination proteins [BR:rva03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Rvan_2098
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ADP71323
UniProt: E3I222
LinkDB
Position
2284532..2287066
AA seq 844 aa
MAKRRTSENLQEANPRDGASGDDGEHVLPSYVEAWFAARGWTARPWQRAMVEAFRERRST
LLIAPTGGGKTLSGFLPSLIDIHETRSQGIHTLYISPLKALTNDIERNLMRPIAEMDLAV
SVESRTGDTPQSKRARQRRAPPNLFLTTPESLMLMLSSPDAERLFAGLRAVIVDEVHSFA
ATKRGDFTALALSRLAALAPQAVRFGLSATVADPAALAAWLGPVGVPAALLQSGLPMDPD
IRLLVPEETRMPYGGFMARYAVPEIYDAIRRAGTSIVFVNTRAQAELMLQMLWDANEENL
PIAVYHGSLSREQRRKAEAMMAAGKIRSVVATAALELGIDWGDVDLVIQVAAPKGVSRLL
QRVGRSNHRLDEPSRAFLVPANRFEALECRAALTAIEKGQLDGEAPGPGSLDVVAQHILS
CACSGPIDPAALFHEVRTALPYADLPRETFDRLFQFAIDGGYVLRAYDRYKRLTALPNGR
FRIANPHVARRHRQNIGVIVEAARLRVMRLSGKGRGGRVLGEVEEYFAQGLTPGDTFFFA
GELLAFVGVRDMTLEARPAAGGEPKVPAYSGGQMPLSTFLADGVRDLLADPAQWSTLPPD
VREWLDLQARFSAIPRADRLLVEHFLEGRFYRTVFYTFAGRRANQTLGMLITRRMEHLGL
KPISFQITDYGLVVSHIAPATSDHVAQFLAPDILGDELEEWILESPMLKRSFRHVATVTG
LVEQQNNAARKSMRQMTISTDLIYDVLRRHEPDHILLKVTRRDAERELLDLKRLSELLTR
YRDRFLFIELSRASPFSIPVLTDVRTEQVRGSGVEHLLAQAAIMHDAEDMMEEVRAAVAG
RVLH
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggcgaaacgacgaacatccgagaatttgcaagaggctaacccgcgagacggcgcttcg
ggcgacgacggcgaacatgtgcttccgtcttatgtcgaggcgtggttcgcggcgcgcggc
tggacggcgcggccatggcagcgcgcgatggtcgaggcgttccgcgagcgccgctccacg
ctgctcatcgcgccgaccggcggcggcaagacgctgtccggcttcctgccgagcctcatc
gacatccacgagacgcgtagccaaggcatccacacactctacatctcgccgctgaaggcg
ctgacgaacgacattgagcgcaacctcatgcgtcccatcgccgagatggacctcgccgtg
agcgtcgaaagccgcacgggcgacaccccgcaatcgaagcgcgcccgccagcgtcgcgcg
ccgccgaacctgttcctcaccacgcccgaaagcctgatgctgatgctctcgtcacccgac
gcggaacgcctgttcgccgggcttcgcgcggtgatcgtggacgaggtgcacagttttgcg
gcgacgaagcggggcgatttcacggcgctcgccctgtcgcgcctcgccgcgctcgcgccg
caggcggtacgcttcggcctctcggcaacggtggcggaccctgccgcgctcgcggcgtgg
ctcggcccggtcggcgtgcctgccgcgcttttgcaatccgggctgccgatggacccggat
attcgcctgctggtgccggaagagacgcgcatgccatacggcggcttcatggcgcgctac
gccgtgcccgaaatctacgacgcgatccgccgcgctggcacctccatcgtcttcgtgaac
acgcgcgcgcaggcggaactcatgctgcaaatgctttgggacgcgaacgaggaaaacctg
ccgatcgcggtctatcacggctcgctcagtcgcgagcagcgccgcaaggccgaggcgatg
atggcggcgggcaagatccgcagcgtggtggcgacagcggcgctggagcttggcatcgac
tggggcgacgtcgatctcgtgatccaggtggccgcgccgaagggcgtcagtcgcctgctt
cagcgcgtcggccgctcgaaccaccggctcgatgagccgagccgcgcgtttctcgtgccc
gcgaaccgcttcgaggcgctggaatgccgcgccgcgctcacggcaatcgagaagggccaa
ctcgacggcgaggcgcccggccccggctcgctcgacgtggtggcgcagcatatcctcagt
tgcgcgtgcagcggccccatcgacccggccgcgctgttccacgaagttcgcaccgcgctc
ccctacgccgatctcccgcgcgagacgttcgaccggctgttccagttcgccatcgacggc
ggctatgtgctgcgggcctacgaccgctacaagcgcctcaccgcgttgcccaacggccgc
ttccgcatcgctaacccgcatgttgcgcggcggcatcggcagaatatcggcgtgatcgtg
gaggcggcgcggctcagggtgatgcggctgtccggcaaggggcgcggcgggcgcgtactc
ggcgaagtggaagaatatttcgcgcaagggctgacgccgggcgacacgtttttcttcgcg
ggcgaactgctggccttcgtcggcgtccgcgacatgacgcttgaagcgcgccccgcggcg
ggcggcgagccgaaggtgccggcctattccggcgggcagatgccgctgtccacgttcctc
gcggatggcgtgcgcgatctgcttgccgatccggcgcagtggagcacgcttccgcctgac
gtgcgcgaatggctcgaccttcaggcgcgcttctcggcgatcccgcgcgccgaccggctc
ctcgtggagcacttcctcgaagggcgcttctaccgcacggtgttctacaccttcgcgggc
cgtcgcgcgaaccagacgctcggcatgctcatcacgcggcggatggagcatctcgggctg
aagccgatcagcttccagatcaccgattacggcctcgtcgtctcgcatatcgccccggcg
acgagcgatcacgttgcgcagtttctggcacccgacatcctcggcgacgaactggaggaa
tggatcctcgaaagcccgatgctgaagcgatccttccgccatgtcgcgaccgtgaccggc
ctcgtcgagcagcagaacaacgcggcgcgcaagtccatgcggcagatgacgatctcgacc
gacctcatctacgacgtgctgcgccgtcacgagccggaccacatcctgctcaaggtgacg
cggcgcgatgccgaacgcgaattgctcgacctcaagcgcctgtccgagcttttgacgcgc
tatcgcgaccgcttcctcttcatcgaactctcgcgcgcctcgcccttttcgatcccggtg
ctgacggacgtgcgcacggagcaggtgcgcggctccggcgtggagcatctgcttgcgcag
gccgcgatcatgcatgacgcggaggacatgatggaggaggtccgcgcggcggtcgccggg
cgcgtgcttcactga

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