Rhodomicrobium vannielii: Rvan_2120
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Entry
Rvan_2120 CDS
T01353
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00300
Lysine biosynthesis
rva00550
Peptidoglycan biosynthesis
rva01100
Metabolic pathways
rva01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rvan_2120
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rvan_2120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rvan_2120
Enzymes [BR:
rva01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Rvan_2120
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADP71345
UniProt:
E3I244
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All DBs
Position
complement(2312848..2314281)
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AA seq
477 aa
AA seq
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MPEQIVAKPLWTGAEIARALGIAPPAADVVVTGVSIDSRTVERGDLFVAIKGERSDGHRF
ITAAFDNGAAGALVSRDYAPQVPLAADEPLFRVDDPFAALEELGRVARARTDARIAAVTG
SVGKTTTKEMLRVMLGESGPTHASVKSYNNFMGVPLSLARMPAASRFGVFEIGMNHAGEI
VPLAKLVRPHVAIVTWVAPVHIEFFTSEAEIARAKAEIFEGLEQGGAAILPADNPHFESL
AAFARERSARVVPFGLSSEAEARLVSFERTEEGSVVTADIFDQRVTFALAAPGRHLAQNA
VAALAGVSLLGGNVEAAAAALARFEAPEGRGRSATFETPRGPVLVIDESYNANPASMHAA
LDVLGAVPPSRYARRIAVLGDMLELGHDAPQFHASLASAVDSNAIDLVFCAGPLMASLHE
SLPAEKRGGWANASEDLRGPVLDAVCGGDAVMIKGSLGSRMGQIAEALKARFASSPS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcaaatcgtggctaagccgctgtggaccggcgcggagatcgcgcgcgcgctc
ggcatcgcgccaccagccgccgatgtcgtcgttacgggcgtcagcatcgacagccgcacg
gtcgagcgcggcgatctgttcgtcgcgatcaagggtgagcgctcggacgggcaccgtttc
atcaccgccgccttcgacaacggcgcggcgggggcgcttgtctctcgcgactacgcgccg
caggtgccgttggcggccgatgagccgcttttccgcgtggacgacccgttcgcggcgctt
gaggagcttggccgcgtcgcgcgcgcccgcacggatgcgcgcatcgccgccgtgaccggc
agcgtcggcaagacgaccacaaaggagatgctgcgcgtgatgctcggcgagagcgggccg
acgcatgcctcggtaaaatcctacaacaatttcatgggtgtgccgctgtctctcgcgcgc
atgcccgccgcttcgcgcttcggcgtgttcgagatcgggatgaaccacgcgggcgagatc
gtgccgctcgcgaaactcgtgcggccgcatgttgcgatcgtgacttgggtcgcgccggtg
catatcgagttcttcacctccgaagcggagatcgcgcgcgcgaaggccgaaatcttcgaa
ggcttggagcaaggcggggcggctatcctgcccgccgacaatccgcattttgaaagtctg
gcggcgttcgcccgcgaaaggagtgcgcgcgtcgtgccgttcgggctcagctccgaagcg
gaagcgcgcctcgtgagcttcgagcgcacagaggaagggtccgtggtcacggccgacatt
ttcgatcagcgcgttacgttcgcgctcgccgcacccgggcggcacctcgcgcagaacgca
gtcgcggcgctggcgggcgtgtcgctcctcggcggcaatgtcgaggccgccgccgcagcc
ctggcgcgctttgaggcacccgagggacgcggccgaagcgctaccttcgaaacgccgcgc
ggccctgtgctcgtcatagacgaaagctataacgccaatccggcttcgatgcacgccgct
ctcgacgtgctgggcgcggtgccgccgtcgcgctacgcgcggcgcatcgccgtgctcggc
gatatgttggagctgggccacgacgcgccacaatttcacgcctcccttgcgagcgccgtt
gactccaacgccatcgatctcgttttctgcgccggtcctttgatggcgagcctgcatgaa
agtctgcccgccgaaaagcgcggcggatgggccaacgcctcggaggatcttcgcgggccg
gtgctcgatgccgtctgcgggggcgacgccgtcatgatcaagggatcgcttggcagccgg
atgggacagatcgcggaggcgctcaaggcgcgtttcgcatcctcgccgagctag
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