Rhodomicrobium vannielii: Rvan_2252
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Entry
Rvan_2252 CDS
T01353
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00300
Lysine biosynthesis
rva00470
D-Amino acid metabolism
rva01100
Metabolic pathways
rva01110
Biosynthesis of secondary metabolites
rva01120
Microbial metabolism in diverse environments
rva01230
Biosynthesis of amino acids
Module
rva_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rvan_2252
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rvan_2252
Enzymes [BR:
rva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Rvan_2252
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Paralog
Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ADP71476
UniProt:
E3I3B5
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All DBs
Position
2468239..2469114
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AA seq
291 aa
AA seq
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MAFSHISFKKMNGLGNDFAVLDARANDFQLTADEASAIANRETGVGCDQVIVLEPSSRAD
VFMRILNADGSEVGACGNASRCVGALVAAELGRERVTIETAAGVLDARISGDGLVTVDMG
VPRFGWRDIPLAKEEPDTRAISLAITLPDGRVLEGPSVANVGNPHAIFWVADVDAYDLAT
FGGALEYDPIFPERANISLAEVIDDQTVKLRVWERGAGITQACGTAACATAVSAARTGRT
GRSVEIRLPGGVIGIEWRADDDHILMTGPVAHEFEGTLTLSGGSLTVARES
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcgcacatatcattcaagaagatgaacggcctcggcaacgactttgccgtg
cttgacgcgcgagcgaacgatttccagctgacggccgacgaggccagcgccatcgccaac
cgcgagacgggcgtcggctgcgatcaggtgatcgtgctggagccgtcgagccgcgcggat
gtgttcatgcgcatcctgaacgcggacggctccgaggtcggcgcctgcggcaatgcgagc
cgctgcgtcggcgcgctggtggccgctgaactcgggcgcgagcgcgtcaccatcgagacg
gcggcgggcgtgctcgacgcgcgcatctcgggcgacggcctcgtgacggtggacatgggc
gtgccgcgcttcggctggcgcgacattccgctcgcgaaggaagagccggacacccgcgcc
atctcgctcgcgatcacgcttcccgatggccgcgtgctggaagggccgagcgtcgccaat
gtgggcaacccgcacgccattttctgggtcgccgacgtcgacgcctacgaccttgccacg
ttcgggggtgcgctggaatacgatccgatctttcccgagcgcgccaacatttcgctcgcc
gaagtgatcgacgaccagaccgtaaaactgcgcgtctgggagcgcggggcgggcatcact
caagcctgcggcaccgccgcctgcgccaccgccgtctccgccgcgcgaacgggtcgcacg
ggccgttccgtcgaaatccgcctgcccggcggcgtaatcggcatcgagtggcgcgcggac
gacgaccacatcctcatgaccggccccgtcgcgcacgagtttgaaggcacgctgacgctg
tccggcggctctctaacggtggcgcgcgaatcatga
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