Rhodomicrobium vannielii: Rvan_2253
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Entry
Rvan_2253 CDS
T01353
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rva03016
]
Rvan_2253
Enzymes [BR:
rva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Rvan_2253
Transfer RNA biogenesis [BR:
rva03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Rvan_2253
Prokaryotic type
Methylthiotransferases
Rvan_2253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
RsdA_SigD_bd
CobT
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ADP71477
UniProt:
E3I3B6
LinkDB
All DBs
Position
2469111..2470364
Genome browser
AA seq
417 aa
AA seq
DB search
MTVDVITFGCRLNTYESEVAKKHAQDAGVTDAVIVNTCAVTGEAVRQARQAIRKLRRERP
GAKIIVTGCAAQIEPETFADMDEADHVIGNGEKTSAATFLSLAAGDLARVRVNDIASVRE
TAPHMISGFGSRARAYVEVQNGCDHRCTFCVIPFGRGPSRSVPAGEVVHQIRALVEDGYR
EVVLTGVDLTSYGADLPGEMKLGRLVRTVLRLVPELPRLRISSIDTMEADDALIDAFAEE
ERLMPHLHLSLQSGDNLILKRMKRRHAREDVIRFCREMREIRPDMVFGADLIAGFPTEDE
AMFENTIRLADECGLSFMHVFPYSPRPKTAAARMPQLDRALVKERAARLRGKADTRLGTH
LADETGKVFEVLMERERVGRTPGFTEIEIAGGAERGGIVRARATGHDKRHLIGECLA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgatgtcatcacattcggttgccgcctcaacacttacgaaagcgaagtggcg
aagaagcacgcgcaggacgcaggcgtgaccgacgccgtgatcgtcaacacctgcgcggtg
acgggcgaagccgtgcggcaggcgcggcaggcgatccgcaagcttcgccgcgagcggcca
ggtgcgaagatcatcgtcacgggttgcgccgcgcagatcgagccggaaaccttcgccgac
atggacgaagccgaccacgttatcggcaatggcgagaagacgagtgccgcgacgttcctg
agcctcgcggcgggcgacctcgctcgcgtgcgggtgaacgacatcgcgagcgtccgcgag
accgcgcctcatatgatttctgggttcggcagccgcgcgcgcgcctatgtcgaggtgcag
aacggctgcgaccaccgctgcaccttctgcgtgatcccgttcgggcgcggaccgtcgcgc
tcggtgcctgcgggcgaagtcgtccaccagatccgcgcgctcgtcgaggacggttaccgc
gaagttgtgctgacgggcgtcgacctcacctcctatggcgcggatctgcccggcgaaatg
aagctcggccgcctcgtgcgcaccgtgctgcgcctcgtgccggaattgccacgcctgcgc
atctcctccatcgacactatggaagcggacgacgcgctcatcgacgccttcgccgaggaa
gaacggctcatgccgcaccttcacctctcgctgcaatcgggcgacaacctcatcctgaag
cgcatgaagcgccgccacgcccgcgaggatgtcatccgcttctgccgcgagatgcgcgag
atccgcccggacatggttttcggcgcggacctcatcgccggcttcccgaccgaggacgaa
gccatgttcgagaacacgatacggctcgccgacgaatgcggcctgtccttcatgcacgtg
ttcccctattcgccgcgcccgaagacggccgccgcgcgcatgccgcagctcgaccgcgcg
ctcgtgaaggaacgcgccgcgcggcttcgcgggaaagccgatacgcggctcggcacgcat
ctagcggatgaaaccggcaaggtgttcgaggtgctgatggagcgcgagcgcgtcggccgg
acgcccggctttacggaaattgaaattgcgggcggcgcggaacgcggcggcatcgtgcgc
gcacgcgcaaccggccacgacaagcgccaccttatcggggagtgcctggcatga
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