Rhodomicrobium vannielii: Rvan_2406
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Entry
Rvan_2406 CDS
T01353
Name
(GenBank) hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00470
D-Amino acid metabolism
rva00550
Peptidoglycan biosynthesis
rva01100
Metabolic pathways
rva01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rvan_2406
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rvan_2406
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rvan_2406
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rva01011
]
Rvan_2406
Enzymes [BR:
rva01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rvan_2406
Peptidoglycan biosynthesis and degradation proteins [BR:
rva01011
]
Precursor biosynthesis
Amino acid ligase
Rvan_2406
BRITE hierarchy
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Paralog
GFIT
Other DBs
NCBI-ProteinID:
ADP71630
UniProt:
E3I4P8
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All DBs
Position
2622422..2623447
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AA seq
341 aa
AA seq
DB search
MHPSISEQLLVAPSTPSTRILFIARHAPLEPNYAARDFEGDGGYPGYYARVFRTLRDLGY
RVRTASEPLALLAAKGEADIVFSLYNRMPINNPEVFIPSLCEYLRIPYVGARPNIRALAE
DKWLAKLAAKAIGIPVSEGAVYADEAALATPPGFPGPYFVKQRFGAASEGISAESIQDDW
AGAARVAAKLMARGMAVLVEGYAPGIDITVPSLGSANGPLVLGVVRPRSDKAGGIITEDL
KRSDPLGYEIFEAGRVEDDLRADAATLWRATGPMDYFRMDYRFDPETGRRVFLEFNICCH
IGRSGSICLAAAQHGLSQADVLGHVIEFSLRRQGVAPEEWR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttcgatttccgaacagctgctcgtcgcaccgtcgacgccgtccacgcgcata
cttttcatcgcgcggcatgccccgcttgagccgaactatgcagcgcgcgacttcgaggga
gatggcggctatcccggctattacgcgcgcgtgttccgcaccttgcgcgacctcggctat
cgggtccgcaccgcgagcgaaccgctggcgctccttgccgcgaagggcgaggccgacatc
gtcttctcgctctacaaccgcatgccgatcaacaacccggaggtgttcatcccctcgctc
tgcgaatatctgcgcattccgtatgtcggcgcgcgaccgaacattcgcgccctcgccgaa
gacaaatggctcgcgaagctcgccgccaaggccatcggcattccggtttctgagggcgcg
gtctacgctgacgaggccgcgctcgccacgccgcccggcttccccggcccgtatttcgtc
aaacagcgtttcggcgcggcctcggagggcatcagcgccgagtcgattcaggacgattgg
gcaggcgctgcgcgcgtggcggcaaagctcatggcgcggggcatggcggtgctcgtcgag
gggtatgcgcccggcatcgacatcaccgtgccgtcgcttggcagcgcgaacggccccctc
gtgctcggcgtggtgcgtccgcgctcggacaaggcgggcggcatcatcaccgaagacctg
aagcgcagcgatccgctcggctatgagattttcgaggcgggccgcgtcgaagatgacctc
cgcgcggacgccgctacgctgtggcgcgccaccgggccgatggactatttccgcatggat
tatcgcttcgatcccgagacggggcggcgcgtcttcctcgaattcaacatctgctgccat
atcggacgcagcggatcgatctgcctagcggcggcgcagcacggcctgagccaagcggac
gtgctcggccacgtgatcgagttcagtctgaggcggcagggcgtcgcgcccgaggaatgg
cggtaa
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