Rhodomicrobium vannielii: Rvan_2426
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Entry
Rvan_2426 CDS
T01353
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00730
Thiamine metabolism
rva01100
Metabolic pathways
rva01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Rvan_2426
Enzymes [BR:
rva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Rvan_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADP71650
UniProt:
E3I5C9
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All DBs
Position
complement(2650126..2651982)
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AA seq
618 aa
AA seq
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MNAPIDPKKIEPVKVTTGSLPGSRKVYAEAAPDVRVPFREIVLHESSGEPPFRVYDTSGP
YSDEATRIDVHAGLARHRDTWVKRRAVEAYEGRAVKPEDDGNVGEAHRAREFSHRYPVYR
AADGQPLTQLELARAGVITEEMVYIANRENVGRTAALDRAKEALADGESFGASIPEFITP
DFVRDEVARGRAIIPANVNHAELEPMIIGRNFLTKVNANIGNSAVSSSVEEEVEKMVWSI
RWGADTVMDLSTGRNIHTTREWIIRNAPVPIGTVPIYQALEKVNGDPVKLDWEVYKDTLI
EQCEQGVDYFTIHAGVRLRYVPLSAKRVTGIVSRGGSIMAKWCLAHHRESFLYERFDEIC
DIMRRYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKVAWAKGCQVMIEGPGHVPL
HKIKVNVEKQLALCGEAPFYTLGPLVTDIAPGHDHITSAIGAAMIGWFGTAMLCYVTPKE
HLGLPDRDDVKAGVIAYKIAAHAADLGKGHPAAQLRDNAISRARFEFRWEDQFNLGLDPE
GSRAMHDETLPKDAHKAAHFCSMCGPKFCSMEITQQVRDYAATLNETPEMAAQSGMDEMS
EKFKEMGGQVYVDLKTTP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcccatcgacccgaaaaagattgagccggtgaaagtcacgacgggttcgctg
ccggggtcgcgcaaggtctatgccgaggcggctcccgacgtgagggtgccgttccgcgag
atcgtgctgcatgagagttcgggcgagccgccgttccgcgtctacgacaccagcggcccc
tattccgacgaagccacgcggatcgacgtgcatgcgggcctcgcccgtcatcgcgacacg
tgggtgaagcgtcgcgccgtcgaagcctacgaaggccgcgccgtgaagcccgaagacgat
ggcaatgtcggcgaagcgcatcgcgcgcgcgaattttcgcatcgctatccggtctaccgc
gccgccgacggtcaaccgctgacgcagctcgaactggcgcgcgcgggcgtcatcaccgaa
gagatggtctacatcgcgaaccgcgagaacgtcggccgaacggcggcgctcgaccgcgcg
aaggaagcgcttgccgatggcgaaagcttcggtgcgtcgattccagagttcatcacgccg
gacttcgtgcgcgacgaggtggctcgcggccgcgccatcatcccggccaatgtgaaccac
gccgagcttgagccgatgattatcggccgcaacttcctcaccaaggtgaacgcgaacatc
ggcaactccgccgtctcgtcctcggtcgaggaagaggtggagaagatggtgtggtccatc
cgctggggcgcggacacggtgatggacctgtccacggggcgcaacatccacacgacgcgc
gagtggatcatccgcaacgcgcccgtgcccatcggcacagtgccgatctatcaggcgctg
gagaaggtcaacggcgatcccgtcaagctcgactgggaggtgtacaaggacacgctcatc
gagcagtgcgagcagggcgtcgattacttcaccatccatgcgggcgtgcggctgcgctat
gtgccgctgtcggcgaagcgcgtcaccggtatcgtgtcgcgcggcggctcgatcatggcg
aagtggtgcctcgcgcatcaccgcgagagcttcctctacgaacgcttcgatgagatttgc
gacatcatgcgccgctacgacgtgtcgttctcgctcggcgacggcctgcgccccggctcc
atcgcggacgcaaacgacgccgcgcagttcgcggaacttgagacgctcggcgaactgacg
aaggtggcttgggcgaagggctgccaggtgatgatcgaggggccgggccatgtgccgctg
cacaagatcaaggtgaacgtcgagaagcagctcgcgctgtgcggtgaagcgccgttctac
acgctcgggccgctcgtcacggacatcgcgccgggccacgaccacatcacgagcgccatc
ggcgcggccatgatcggctggttcggcacggcgatgctctgctacgtcacgccgaaggag
catctcggcctgcccgaccgcgacgacgtgaaggcgggcgtgatcgcctacaagatcgcg
gcgcacgcggccgacctcggcaagggccatcccgccgcgcagcttcgcgacaacgcgatt
tcccgcgcgcgcttcgagttccgctgggaggatcagttcaatctcggcctcgaccccgag
ggcagccgcgccatgcatgacgagacgctgccgaaggatgcgcacaaggctgcgcatttc
tgttcgatgtgcgggccgaaattctgttcgatggaaatcacgcagcaggtgcgcgactac
gccgccacactgaacgaaacgccggagatggccgcgcagtcgggcatggatgagatgagc
gagaagttcaaggagatgggcgggcaggtctacgtggacttgaagacgacgccgtaa
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