Rhodomicrobium vannielii: Rvan_2904
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Entry
Rvan_2904 CDS
T01353
Name
(GenBank) 9-cis-epoxycarotenoid dioxygenase
Organism
rva
Rhodomicrobium vannielii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-ProteinID:
ADP72110
UniProt:
E3HZ63
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Position
3164830..3166188
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AA seq
452 aa
AA seq
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MQDRVEPPFWMQGNFAPVTEEVTAFDLPVEGAIPPELSGLYVRNGANPRHGQSSHWFLGD
GMLHGVAIEGGKAQWYRNRYVRTPIFEGAPRHPLAGLDIRYALSNTSVIAHASRIMALVE
NALPMEISRELETRGFNDFGGRLATPCTAHPKICPTTGEMHFFGYRVIPPYLTYHVADAA
GALIRSVEIPVKAATMIHDFALTARHAIFMDLPVVFDMPTAMAGSTMPFHWSESYGARLG
VLPRGGGSESLRWIDIEPCFVYHVANAFEEDDGTIVLDVARYDEHWRDGPKRNAFDTASL
TRWRIPPGATRAEETRIDDRSIEFPRIDERRIGVPHKAVYALATDGSLADGVFTELLKYD
LTSGRVDARRFDGELPSEFTMVPAAEAAGEDEGWLMGYVYDRASATSDLVILDAGDIGGK
PVARIRLPVRVPQGFHGTWIASEPRACGAAAR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatcgagtcgagccgcccttctggatgcagggcaacttcgcgccggtgacggaa
gaagtcaccgcgtttgacttgcccgtcgaaggcgcaattccgccggagctttccggcctc
tacgtgcgaaacggcgcgaaccctcgccacggccaatcgagtcattggttcctcggcgac
ggcatgctccacggcgtggcgatcgagggcggcaaggcacagtggtatcgcaaccgctat
gtgcgcacgccgatcttcgagggcgcgccgcgccacccgcttgcggggctcgacattcgc
tacgccctttccaacacgagcgtgatcgcccatgcgagccgcatcatggcgctcgtcgaa
aatgcactgccgatggagatttcgcgcgagcttgagacgcggggcttcaacgatttcggc
ggccgcctcgccacgccatgcacggcgcatcccaagatctgcccgacgaccggcgaaatg
cacttcttcggctatcgcgtgatcccgccctaccttacctatcacgtagcggatgcggcg
ggcgcgctcatccgcagcgtggaaatcccggtcaaggccgcgaccatgatccacgatttc
gcgctgacggcccgccacgcgatcttcatggacctgccggtggtgttcgacatgccgacg
gccatggcgggcagcacgatgccgtttcactggagcgaaagctacggcgcgaggctcggc
gtgctgccgcgcggcggcggctcggaaagcctgcggtggatcgatatcgagccgtgcttc
gtgtatcacgtggcgaacgccttcgaggaggatgacggcaccatcgttctcgacgtggcc
cgctatgacgagcactggcgcgacgggccgaaacgaaacgccttcgataccgcctcgctc
acgcgctggcgcatcccgccgggagcgacccgcgccgaggaaacacgcattgacgaccgc
agcatcgagtttccccgcatcgacgaacgccgcatcggtgtgccccataaagccgtttac
gcgctggcaaccgatggaagcctcgcggacggcgttttcaccgagcttctgaagtacgac
ctgacaagcggccgcgtcgatgcgaggcgcttcgatggcgaactgccgagtgagtttacc
atggtgccggcggcagaggcggcgggcgaggacgaaggttggctgatgggctatgtctac
gaccgcgcgagcgccacgagcgacctcgtcatcctcgacgcgggcgacatcggcggcaag
cctgtcgcgcgaattcgcctccccgtccgagtgccgcagggcttccacggcacgtggatc
gcatcggagcctcgggcgtgcggcgcggccgcacgttag
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