Rhodomicrobium vannielii: Rvan_3083
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Entry
Rvan_3083 CDS
T01353
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rvan_3083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_3083
Enzymes [BR:
rva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rvan_3083
DNA repair and recombination proteins [BR:
rva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rvan_3083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ADP72286
UniProt:
E3I0G8
LinkDB
All DBs
Position
complement(3357636..3359873)
Genome browser
AA seq
745 aa
AA seq
DB search
MAPSDLPLFDADLPEPPARGASTRATVPVLLPLALDEPYTYEVPAGETLAPGDFVVVPLG
PVKRIGVVWREASTRPVDPRKLKPVLARLDEVPPLPPLNLAFADWVAQYTLAPKGMVLQM
MMSARLVFEAEEPRFGFRNGSGVPSRMTDARQRVLAAVADGAVWSKKRLMDAAGVSAAVI
DGLAQAGALIRAELPRTRAFAPRPDFAFASLSDAQLTAAGALQQTIAEGGFSATLLDGVT
GSGKTEVYFEAVAEALRHGERQVLILLPEIALTNQFLERFERRFGCRPGEWHSAVSPKER
ARVWRGVALGEVRVVCGARSALFLPFTDLGLIVVDEEHDPSFKQDDRVTYQARDMAVVRA
SLGKIPIVLASATPSVESIVNVQRGRYRHAVLPGRFSGNALPDVEAVDLRAVPPERGMWI
SEPLVGAVNEALAKGEQALLFLNRRGYAPLTLCRACGHRFTCPQCTAYLVEHRLRGRLIC
HHCGFSLPFPKACPSCHGEGTLAASGPGIERVTEEAQNRWPEARLAVLSSDLVPSTAALR
EILTRITEGDVDIVVGTQLVSKGHNFPKLSFVGVVDGDLSLATADPRAGERTFQLLHQVT
GRAGRFGAPGRGLIQTHFPDHPVMRALVTGNREAFYEAEIGLREEAGYPPFGRLAALIVS
GKTRYDAEGYARALALAAPEASRIQVLGPVEAPLAIIRGLHRQRLLVKAAREADLQAYLR
AWLASVDAPRGGVTLHIDVDPHSFL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcagacctgccccttttcgacgcggatttgcccgagccgcccgctcgcggc
gcgtccacgcgcgcgactgtgcctgtgctgctcccgctcgccctcgacgaaccttacaca
tatgaagtgcccgcaggtgaaacgctcgcgcctggcgatttcgtggtcgtgcccctcggc
ccggtgaaacgcatcggcgtcgtgtggcgcgaggcgtcgacgcgcccggtcgatccccga
aagctgaagcccgtgctcgcgcgcctcgacgaggtgcccccactgccgccgctcaatctc
gccttcgcggactgggtcgcgcagtacacgctcgcgccgaagggcatggtgctgcaaatg
atgatgagcgcgcggctcgttttcgaggcggaggagccgcgtttcggctttcgcaacgga
agcggtgtgccctcgcgcatgacggacgcgcgccagcgcgtgttggccgccgtggccgat
ggcgcggtgtggtcgaaaaagcggctcatggatgccgccggtgtcagcgctgcggtgatc
gacggtctggcgcaagcgggcgcgctcatccgcgccgagcttccgcgcacgcgtgctttc
gctccgcggcccgacttcgctttcgcgagcctcagcgacgcacagctcacagcggctggt
gcgcttcagcaaaccatcgcggagggcggcttctcggcaacgcttctcgacggcgtgacc
ggctccggcaagaccgaggtgtatttcgaggcggtggcggaagcgctgcggcacggcgaa
cgacaggtgctcattctgctgccggaaatcgcgctcacgaatcagtttctcgaacgcttc
gagcgccgcttcggctgccgccccggcgaatggcactccgccgtctcgccgaaggagcgc
gcgcgcgtctggcgcggcgtggcgctgggcgaggtgcgggtggtgtgcggcgcgcggtcg
gcgctgttcctgcccttcacggacctcggccttatcgtggtggacgaagaacacgaccca
tccttcaagcaggacgaccgcgtgacatatcaggcgcgcgacatggccgtagtgcgggcg
tcgctcggcaaaattcccatcgtgctggcttcggcgacaccgtccgtcgaaagcatcgtg
aacgtccagcgcgggcgctatcggcatgcggtgctgcccggccgcttctctggcaacgcg
ctgcccgatgtcgaggcggtggacctgcgcgcagtgccgcccgagcgggggatgtggatc
agcgagccgcttgtcggcgcggtgaacgaggcgcttgcgaagggcgagcaagcgctcctg
ttcctgaaccgccggggctatgcgccgctgacgctgtgccgcgcctgcggccatcgcttc
acctgcccgcaatgcacggcctatctcgtggagcatcgcctgcgcgggcggctcatctgc
caccattgcggtttctcgctgccgtttccgaaggcgtgcccgtcttgccacggcgagggg
acgctcgccgcgtccggccccggcatcgagcgcgtgaccgaggaggcgcagaaccgctgg
cccgaggcgcggctcgcggtgctgtcgagcgacctcgtgccctcgacagcggcgctgcgc
gaaatcctgactcgcatcacggagggcgacgtcgatatcgtcgtcggcacgcagctcgtg
tcgaaggggcacaacttcccgaaactgtcgttcgtcggcgtggtggacggcgatctgagc
ctcgccaccgccgatccgcgcgcgggcgagcgcacatttcagctcttgcatcaggtgacg
ggccgcgcgggtcgcttcggcgcaccggggcgcgggctgatccagacgcatttccccgat
catccggtgatgcgcgcgctggtcaccggcaaccgcgaggctttctacgaggcggaaatc
ggcttgcgcgaagaggcgggctatccgccattcgggcggctcgcggcgctgatcgtctcc
ggcaagacgcgctacgatgcggaagggtatgcgcgcgcgcttgcgctggccgcgccggag
gcgtcacgcattcaggtgctggggccggtagaggcgccgctcgcgatcatccgtggattg
catcggcagcggctgctcgtgaaggccgcgcgcgaggccgatcttcaggcgtatctgcgg
gcgtggctcgccagcgtggatgcgccgcgcggaggcgtcacgcttcatatcgatgtcgat
ccgcacagctttttgtag
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