KEGG   Rhodomicrobium vannielii: Rvan_3141
Entry
Rvan_3141         CDS       T01353                                 
Name
(GenBank) Type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rva  Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:rva00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rva02048]
    Rvan_3141
Enzymes [BR:rva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Rvan_3141
Prokaryotic defense system [BR:rva02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Rvan_3141
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N HSDR_N_2 nSTAND3 AAA_16
Other DBs
NCBI-ProteinID: ADP72343
UniProt: E3I120
LinkDB
Position
complement(3417986..3420313)
AA seq 775 aa
MFESETESDTRANRIDPVLAAAGWGSVEGSRIRREVICPGRIMPGGKRGEQLTADYVLIY
RDQKLAVIEAKRAGLHHTTGVAQAKDYAGRLKARFAYATNGLGWYETDMIGGAEGDLNQP
FPTPGQLWERCFAEASLWRERFGAVPFEVAGGKWELRYYQHNAINAVLEAVGRGEKRVLL
TLATGTGKTSIAFQIAWKLFHARWNLSGEPTRRPRILFLADRNILADQAYNAFSAFDPNA
ITRIDPDTLRKKGGVPKNASVFFTIFQTFMTGDGQPSYEGYPPDFFDFIVIDECHRGGAN
DEGNWRGIMEYFSPAVQLGLTATPRRKHNADTYAYFGEPVYVYSLREGIEDGFLTPFKVR
QMASTIDEYVWDGTDEIISGEVEKDKYTEADFNTRIVIEGRERSRVAEFMSEIDQRQKTL
VFCATQEHALRVRNYINQIKTSSNPNYCHRVTADDGKLGEQHLRDFQDNDKTIPTILTTS
QKLSTGVDARNVRNIVLMRPIRSMIEFKQIIGRGTRTYDRKDFFTIYDFVKAHEKFNDPE
WDGEPLPPEEPRPRPPKPEPPEKPEPPEPPEGGEEGGDDEPKPKLVIKLADGKERLIQYI
AATSYWGPGGKPMTAQQFMESLFGDLSGMIDDEDELRGKWSDPDERERFVTLLEQRGYGA
DQLADMRRLIDAPNSDLFDVLAYIRFTTPPKTRSDRANAARNGGLDGADTAPMRDFLLDV
LKAYETVGETELSPRKLGDLLKARYGTFEDAKSKLGDMLSIRQAFINVQRYLYRG
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgttcgagagcgaaaccgaatctgacacgcgggccaaccggatcgacccggttcttgcc
gctgcgggctggggttcggtcgaaggctcccgtatccggcgcgaagtgatctgccccggt
cgcatcatgccgggcggcaagcgaggcgaacagctcaccgccgactacgtgctgatctac
cgagaccagaagctcgccgtgatcgaggccaagcgggcgggcctacatcacaccaccggc
gtcgctcaggccaaggactatgccgggcggctcaaggcgcggttcgcctacgccaccaac
ggtctcggctggtacgagaccgacatgatcggcggcgcggaaggcgatttgaaccagcct
tttccgacgccgggtcagctttgggagcgatgctttgcggaagccagcctttggcgcgaa
cggttcggggcggtgccgttcgaggtggcgggtggcaagtgggaactgcgctactatcag
cacaacgccatcaatgccgtgctggaagccgtaggcaggggcgagaagcgcgtgctgctg
acgctggctaccggcactggcaagacctccatcgccttccagatcgcatggaagctgttc
cacgcccgttggaacctctccggcgagccgacgcgccgcccacgcatcctgtttctggcg
gatcgcaacatcctcgcggatcaggcttacaacgccttttcggccttcgaccccaatgcg
atcacccggatcgatccggacacgctccgcaaaaaaggcggagtgccgaagaatgccagc
gtcttcttcacgatcttccagaccttcatgaccggcgacggccaaccgagttacgaaggc
tatccgcccgatttcttcgacttcatcgtcatcgacgaatgccaccgaggtggcgcgaac
gatgagggcaactggcgcgggatcatggaatatttctctcccgccgtgcagctcggcctg
accgctacgccccgccgcaagcacaatgccgacacctacgcctacttcggcgagccggtt
tatgtgtattcgctgcgagaggggatcgaggatggcttcctgacacccttcaaggtgcgc
cagatggccagcacgattgacgaatatgtgtgggacggcaccgacgaaatcatttcgggc
gaggtcgagaaagacaaatacacagaggccgatttcaacacccgcatcgtgatcgagggc
cgcgagagaagccgcgtggccgagttcatgtccgagatcgatcagcgccagaagacgctg
gttttctgtgccacacaggaacacgcgcttcgggtgcgcaactacatcaaccagatcaag
accagctcgaatcccaactactgccaccgtgtcaccgccgatgatggcaagctgggtgaa
cagcatctccgcgactttcaggacaacgacaagaccatcccgacgatcctgacaacctcg
cagaagctctcgaccggcgtggatgcgcgcaacgtccgcaatatcgtgttgatgcggccg
atacggtcgatgatcgagttcaagcagatcatcgggcgaggaacgcgaacctacgaccgg
aaagacttcttcacgatttacgacttcgtgaaagcgcatgagaagttcaacgatcccgag
tgggacggtgaaccgctgccgccggaagagccgcgaccgcggccgcccaaacctgaacca
cccgaaaaacccgagccaccggaaccgcctgaaggtggcgaggaaggcggagatgacgag
ccaaagcccaagctggttatcaagctggcagacggcaaggaacggctcattcaatacatc
gccgcgacgagctattggggaccgggcggcaagccgatgacggcccaacagttcatggag
agtctgtttggcgatctgtctggcatgatcgacgatgaggacgagttgcgtgggaagtgg
agcgatccggacgagcgcgaacgcttcgtgaccttgctggaacagcgcggctatggtgcc
gaccaattggccgatatgcggcgtctgatcgatgccccaaacagcgacttgtttgacgtt
ctcgcctacatccggttcacgacgccaccgaaaacccgctctgatcgtgcgaacgccgca
agaaacggcggtctggacggcgctgacaccgccccaatgcgagactttcttcttgacgtg
ctgaaagcctatgaaaccgttggagagaccgaactctctccgcgcaaactcggggacttg
ctgaaagcacgctacggcaccttcgaggacgcgaaatcgaagctgggggacatgctctca
atccgccaagcctttatcaacgtgcagcgttacctatacagaggctga

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