Rhodomicrobium vannielii: Rvan_3158
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Entry
Rvan_3158 CDS
T01353
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_3158
DNA repair and recombination proteins [BR:
rva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Rvan_3158
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Yop-YscD_ppl_1st
GcnA_N
Motif
Other DBs
NCBI-ProteinID:
ADP72357
UniProt:
E3I134
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All DBs
Position
3435777..3436232
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AA seq
151 aa
AA seq
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MTDIVDKTTRSRMMAGIRGKDTKPELALRRALHARGLRYRLHVKDISGRPDLVFSKHRAV
VFVHGCFWHRHTACRYATDPSTRVEFWQSKFDANTARDFAVRSELLAGGWRVATIWECAL
RKPHQVEVAATLLSVWLRDGRAKLEIGETDL
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatatagtggacaagacgacccgatcgaggatgatggccgggatcaggggcaag
gacaccaagcccgaactggccttgagacgggcattgcacgcccgtggcttgcgttatcgc
ttgcatgtgaaggacatctcgggtcggcctgacctcgtgttctcaaagcaccgggcggtg
gtcttcgtgcatggttgcttctggcaccgccatacagcttgtcgctatgctaccgacccc
tctactcgcgtggaattctggcagtccaagttcgacgctaacaccgctcgggacttcgcg
gtgcggagcgaactcctcgcgggcggatggcgagtggcaacgatctgggaatgcgcgctt
agaaaacctcatcaagtagaggtggctgccactcttctttccgtctggctgcgtgatggc
cgtgccaagctggagatcggagaaacagacctgtga
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