Rhodomicrobium vannielii: Rvan_3198
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Entry
Rvan_3198 CDS
T01353
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rva03021
]
Rvan_3198
03009 Ribosome biogenesis [BR:
rva03009
]
Rvan_3198
Transcription machinery [BR:
rva03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Rvan_3198
Ribosome biogenesis [BR:
rva03009
]
Prokaryotic type
rRNA transcription factors
Rvan_3198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_NusA_C
KH_1
S1
PGBA_C
EF-hand_9
Motif
Other DBs
NCBI-ProteinID:
ADP72393
UniProt:
E3I1L8
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All DBs
Position
3480567..3482312
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AA seq
581 aa
AA seq
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MAQSGISANRLELLQIADAVAREKSIDRTLVLSAMEDAIQKAAKSRYGSENEIRAEIDPR
TGEIRLSRLLEVVERVTLDATEISLKDAMKRNPEAEVGDFIAEPLPPLDFGRVAAQNAKQ
VIVQKVREAERERQFEEYKDRMSEIVSGVVKRAEYGNVMIDLGRAEAIIRRDETLPRENY
KLGDRVRAYVYDVRRENRGPQIFLSRTRPEFMAKLFAQEVPEIYDGIVEIKSVARDPGSR
AKIAVVSKETSVDPVGACVGMRGSRVQAVVNELQGEKIDIIQWSGDPATFIVNALAPAEV
AKVVLDEESERIEVVVPDEQLSLAIGRKGQNVRLASQLTGWDIDILTEAEESERRQKEFA
ERTAAFVNALDVDEMIAQLLVSEGFASVEELAFVDSHEVAIIEGFDENTALEIQERAREF
LERQEAELNEKRRALGVADELAEVPGVTTAMLVAFGENNIKTVEDLADCATDELAGWTER
AHGQTKQNPGILQGFDLSKSDIEHLIIAARVKAGWIEAPEEPEEEPAEADSLEDGSALEA
HEDEPTEADSHEGAEAEAHDSAEAEAHEEGGEHAQSQEKAL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatccggaattagtgcgaaccggctggaactgttgcagatcgcggacgcggtc
gcgcgcgagaagtcgatcgaccgcacgctcgtgctttccgccatggaagacgcgatccag
aaggccgcgaagtcgcgctacggcagcgaaaacgagatccgcgccgagatcgatccgcgc
accggcgagatccgcctgtcgcgccttctcgaagtggtggagcgcgttacgctcgacgcg
accgagatcagcctcaaggatgcgatgaagcgcaacccggaagccgaggtgggtgatttc
atcgcagagccactgccgcctctcgacttcggccgcgtggcggcgcagaacgccaagcag
gtcatcgtgcaaaaggtgcgcgaagccgagcgcgagcgtcagttcgaggaatacaaggat
cgcatgagcgagatcgtcagcggcgtcgtgaaacgtgcggagtatggcaacgtcatgatc
gaccttggccgcgccgaggcgatcatccgacgtgacgaaacgctgccgcgcgaaaattac
aagctcggcgaccgcgtgcgcgcctatgtttatgacgtccgccgcgaaaaccgcggtccg
cagatcttcctgtcccgcacgcgccccgaattcatggcgaagctgttcgcgcaggaagtg
ccggaaatctacgacggcattgtcgaaatcaagtccgtggcgcgtgatccgggcagtcgc
gcgaagatcgcggtcgtctcgaaggaaacgagcgtcgatccggttggcgcctgcgtcggc
atgcgcggcagtcgcgtgcaggccgtcgtgaacgagcttcagggcgaaaagatcgatatc
attcagtggtcgggcgatcccgcgacgttcatcgtgaatgcgcttgcgcctgccgaagtg
gcgaaggtcgtgctcgacgaggagtcggagcgcatagaagtcgtggtgccggacgagcag
ttgagcctcgccatcggccgtaagggccagaatgttcgcctcgcctcgcagcttacgggc
tgggacatcgacatcctgacggaagccgaggaatcggagcgccgtcagaaggaatttgcc
gaacgcacggccgccttcgtcaatgcgctcgatgtggacgagatgatcgctcagttgctc
gtgtcggaaggttttgcctcggtggaggaactggcctttgtcgactcgcatgaggtcgcg
atcatcgaaggcttcgacgaaaacaccgcgctggaaatccaggagcgcgcccgcgaattt
cttgagcgtcaagaggccgaacttaacgagaagcgccgcgcgctcggcgtggcggacgaa
ttggccgaggtgccgggcgtcacgaccgcgatgcttgtcgcgttcggcgaaaacaacatc
aagacggtcgaagatctcgccgactgcgcgacagacgagcttgcgggctggacggagcgc
gctcacggccagacgaagcagaatcccggcatccttcaggggttcgatctttcgaagtcg
gacatcgagcatcttatcatcgccgcccgcgtgaaggcgggctggatcgaggcgccagaa
gaacccgaggaagagcctgccgaggccgatagccttgaggatggctcggccctggaagct
catgaggacgagcccaccgaggcggacagccacgagggcgctgaggccgaagcgcacgac
agcgcggaagccgaagcgcacgaggaagggggcgagcatgcccaaagccaagaaaaagcg
ctctga
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