KEGG   Rhodomicrobium vannielii: Rvan_3198
Entry
Rvan_3198         CDS       T01353                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
rva  Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:rva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rva03021]
    Rvan_3198
   03009 Ribosome biogenesis [BR:rva03009]
    Rvan_3198
Transcription machinery [BR:rva03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Rvan_3198
Ribosome biogenesis [BR:rva03009]
 Prokaryotic type
  rRNA transcription factors
   Rvan_3198
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 KH_2 KH_NusA_C KH_1 S1 PGBA_C EF-hand_9
Other DBs
NCBI-ProteinID: ADP72393
UniProt: E3I1L8
LinkDB
Position
3480567..3482312
AA seq 581 aa
MAQSGISANRLELLQIADAVAREKSIDRTLVLSAMEDAIQKAAKSRYGSENEIRAEIDPR
TGEIRLSRLLEVVERVTLDATEISLKDAMKRNPEAEVGDFIAEPLPPLDFGRVAAQNAKQ
VIVQKVREAERERQFEEYKDRMSEIVSGVVKRAEYGNVMIDLGRAEAIIRRDETLPRENY
KLGDRVRAYVYDVRRENRGPQIFLSRTRPEFMAKLFAQEVPEIYDGIVEIKSVARDPGSR
AKIAVVSKETSVDPVGACVGMRGSRVQAVVNELQGEKIDIIQWSGDPATFIVNALAPAEV
AKVVLDEESERIEVVVPDEQLSLAIGRKGQNVRLASQLTGWDIDILTEAEESERRQKEFA
ERTAAFVNALDVDEMIAQLLVSEGFASVEELAFVDSHEVAIIEGFDENTALEIQERAREF
LERQEAELNEKRRALGVADELAEVPGVTTAMLVAFGENNIKTVEDLADCATDELAGWTER
AHGQTKQNPGILQGFDLSKSDIEHLIIAARVKAGWIEAPEEPEEEPAEADSLEDGSALEA
HEDEPTEADSHEGAEAEAHDSAEAEAHEEGGEHAQSQEKAL
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggcgcaatccggaattagtgcgaaccggctggaactgttgcagatcgcggacgcggtc
gcgcgcgagaagtcgatcgaccgcacgctcgtgctttccgccatggaagacgcgatccag
aaggccgcgaagtcgcgctacggcagcgaaaacgagatccgcgccgagatcgatccgcgc
accggcgagatccgcctgtcgcgccttctcgaagtggtggagcgcgttacgctcgacgcg
accgagatcagcctcaaggatgcgatgaagcgcaacccggaagccgaggtgggtgatttc
atcgcagagccactgccgcctctcgacttcggccgcgtggcggcgcagaacgccaagcag
gtcatcgtgcaaaaggtgcgcgaagccgagcgcgagcgtcagttcgaggaatacaaggat
cgcatgagcgagatcgtcagcggcgtcgtgaaacgtgcggagtatggcaacgtcatgatc
gaccttggccgcgccgaggcgatcatccgacgtgacgaaacgctgccgcgcgaaaattac
aagctcggcgaccgcgtgcgcgcctatgtttatgacgtccgccgcgaaaaccgcggtccg
cagatcttcctgtcccgcacgcgccccgaattcatggcgaagctgttcgcgcaggaagtg
ccggaaatctacgacggcattgtcgaaatcaagtccgtggcgcgtgatccgggcagtcgc
gcgaagatcgcggtcgtctcgaaggaaacgagcgtcgatccggttggcgcctgcgtcggc
atgcgcggcagtcgcgtgcaggccgtcgtgaacgagcttcagggcgaaaagatcgatatc
attcagtggtcgggcgatcccgcgacgttcatcgtgaatgcgcttgcgcctgccgaagtg
gcgaaggtcgtgctcgacgaggagtcggagcgcatagaagtcgtggtgccggacgagcag
ttgagcctcgccatcggccgtaagggccagaatgttcgcctcgcctcgcagcttacgggc
tgggacatcgacatcctgacggaagccgaggaatcggagcgccgtcagaaggaatttgcc
gaacgcacggccgccttcgtcaatgcgctcgatgtggacgagatgatcgctcagttgctc
gtgtcggaaggttttgcctcggtggaggaactggcctttgtcgactcgcatgaggtcgcg
atcatcgaaggcttcgacgaaaacaccgcgctggaaatccaggagcgcgcccgcgaattt
cttgagcgtcaagaggccgaacttaacgagaagcgccgcgcgctcggcgtggcggacgaa
ttggccgaggtgccgggcgtcacgaccgcgatgcttgtcgcgttcggcgaaaacaacatc
aagacggtcgaagatctcgccgactgcgcgacagacgagcttgcgggctggacggagcgc
gctcacggccagacgaagcagaatcccggcatccttcaggggttcgatctttcgaagtcg
gacatcgagcatcttatcatcgccgcccgcgtgaaggcgggctggatcgaggcgccagaa
gaacccgaggaagagcctgccgaggccgatagccttgaggatggctcggccctggaagct
catgaggacgagcccaccgaggcggacagccacgagggcgctgaggccgaagcgcacgac
agcgcggaagccgaagcgcacgaggaagggggcgagcatgcccaaagccaagaaaaagcg
ctctga

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