Rhodomicrobium vannielii: Rvan_3202
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Entry
Rvan_3202 CDS
T01353
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Rvan_3202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_3202
Enzymes [BR:
rva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Rvan_3202
DNA repair and recombination proteins [BR:
rva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Rvan_3202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ADP72397
UniProt:
E3I1M2
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All DBs
Position
complement(3486412..3488001)
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AA seq
529 aa
AA seq
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MQAELLSNIAEFTVSELSFAIKRTVEDAYGLVRLRGEISGYRGQHSSGHAYLCLKDDKAR
IDAVIWRGTFSHLKFKPEEGLEVIVTGRITTFPGKSSYQIVIEQLEPAGAGALMALLEER
KKKLAAEGLFDESRKRPLPFWPEVVGIVTSPTGAVIRDMLHGFTERCPTRVIVWPVRVQG
ETCGAEVSAAIRGFNALDGFGPLPRPDLLIVARGGGSLEDLWGFNEEAVVRAAAESAIPL
ISAVGHETDWTLIDLVADARAPTPTKAAEWAVPKHADLIIRLGECIERARRCVRRNLEQL
RAEFRGAERGLPRPHTLLQVPRQRLDTAGARLGQALIYFTERSRGRFERSAVRLSPRLVA
RPIVEARERLGRAATFNARAFRDVIVRKRERWTVRAERLNAGLLATPTQRGIERLLMLAA
RADQAVTNLAHRHRQRLAALGQLLQSLSHKSVLERGFALVRDADGRVIRRAASVSAAAAL
DIEFADGHVQAHRAAADAEADTSASRRRSAAQVPRRATSKDKDGQGTLL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggagcttctttcgaacatcgcggaattcacagtctccgagctttccttcgcc
atcaagcgcacggtggaggacgcttacggcctcgtgcgtctgcgcggtgaaatctccggc
tatcgcgggcagcacagctccggccacgcctatctttgtctcaaggacgacaaggcgcgc
atcgacgcggttatctggcgcggcacgttcagccacctcaaattcaagcccgaggaaggg
cttgaggtgatcgtcacgggccgcatcaccaccttccccggcaagtcgagctatcagatc
gtcatcgagcaactcgaaccggcgggcgcgggcgcgctcatggcgctgctcgaagagcgc
aagaagaagctcgccgccgaggggctgttcgacgagagccgcaagcggccgctgccgttc
tggcccgaagtcgtcggcatcgtgacgtcgccgacgggcgcggtcatccgcgacatgctg
cacggcttcaccgagcgctgcccgacgcgcgtcatcgtgtggccggtacgcgtgcagggc
gaaacttgcggcgcggaggtttccgccgcgatccgtggcttcaacgcgctcgacggtttt
gggccgctgccgaggcccgatctgctcatcgttgcgcgcggcgggggcagcctcgaagac
ctgtggggcttcaacgaggaagccgtggtgcgcgccgccgccgaaagcgccatcccgctg
atttccgccgtcggccatgagaccgactggacgctgatcgacctcgtcgccgacgcccgc
gcgccgacccccaccaaggccgcagaatgggccgtgccgaagcacgccgacctcataatc
cgcctcggcgagtgcatcgagcgcgcgcggcgctgcgtccgccgcaacctcgaacagttg
cgcgcggagtttcgcggcgcggaacgcgggctgccgcgcccacatacgcttcttcaggtg
ccgcgccagcgcctcgacacggctggtgcgcggctcgggcaggcgctcatctatttcacg
gagcgctcgcgcggacgtttcgaacgctccgccgtgcgcctctcgccgcgcctcgtcgcg
cggcccatcgtcgaggcccgcgagcgtctcggccgcgccgccaccttcaacgcccgggcc
ttccgtgatgtgatcgtccgcaagcgcgagcgctggaccgtccgcgccgagcgcctcaac
gcgggccttctcgccacgccgacgcaacgcgggatagagcggcttctcatgctcgcggcc
cgcgccgatcaggccgtgacgaacctcgcgcaccgccacaggcagcggctcgccgcgttg
ggccagcttctccagagccttagccacaagagcgtgctcgaacgcggcttcgcgctcgtg
cgagacgcggacggccgggtgatacgccgcgccgcatcggtgtctgccgccgccgctctt
gacatcgaattcgcggatggtcacgttcaggctcacagggccgccgccgacgcggaagcc
gacacttcggcgtcgcgccgacgctcagctgcgcaagtaccccggcgcgcgacttccaag
gacaaggacgggcagggcacgctgctttaa
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