Rhodomicrobium vannielii: Rvan_3231
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Entry
Rvan_3231 CDS
T01353
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00350
Tyrosine metabolism
rva00360
Phenylalanine metabolism
rva00380
Tryptophan metabolism
rva01100
Metabolic pathways
rva01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Rvan_3231
00360 Phenylalanine metabolism
Rvan_3231
00380 Tryptophan metabolism
Rvan_3231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rva04147
]
Rvan_3231
Enzymes [BR:
rva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Rvan_3231
4.1.1.105 L-tryptophan decarboxylase
Rvan_3231
Exosome [BR:
rva04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Rvan_3231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADP72426
UniProt:
E3I1Q1
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All DBs
Position
3522695..3524113
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AA seq
472 aa
AA seq
DB search
MDAQDFRRFGHQLIDWVADYREGLASRPVMSEAQPGDIRAKFPAHPPQKGGRLDEAVAAL
DRDVLPGITHWNHPSFFAYFPSNTSYASILADLVIAGLGAQGMSWQTSPAATEVEEVVMD
WLRQMVGLGEAFTGVIHDTASTATLTALLSARERASNFSQNGRGLQSGDAPLVVYASDQS
HSSIEKAALLAGFGRDHLRLIETDDDHAIRLDLLEAAIAEDVRRGLRPCAVIACIGTTGT
TAVDPLAKIADIAARFGPWLHVDAAMAGTAMVLPECRDHWTGIERADSLVFNPHKWMGVG
FDFSAYYVRDPEHLIRVMSTNPSYLQTKQDGAVKNYRDWHIQLGRRFRALKLWFHLMDVG
VEGVQALVRRDLGNAQWFKDRVDAAADWERLAPVPFQTICVRHVPAALKGDEAALKAHNL
ELARRVNEGGEAYITPALLKGKQILRVSIGATATERAEVQALWVLLNEAAAP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcaggacttccgccgcttcgggcaccagttgatcgattgggtcgcggattac
cgggagggcctcgccagccgccccgtcatgagcgaggcgcagccgggcgacatccgcgcg
aagtttcccgcgcacccgccgcagaagggcgggcggcttgacgaagccgtggccgcgctc
gaccgcgacgtgctcccaggcatcacgcattggaaccacccgagcttcttcgcctacttc
cccagcaatacgagctacgcgtcgatcctcgcggatttggtaatcgccggactcggcgca
caaggcatgagctggcagacgagccccgccgcgaccgaggtggaggaagtcgtcatggac
tggcttcggcagatggtgggtcttggcgaggcatttacgggcgtcatccacgacacggcc
agtaccgcgaccctcaccgcccttctcagcgcccgcgagcgcgcctcgaacttcagccag
aacggccggggacttcagtccggcgacgcgccgcttgtagtgtatgcctccgaccagagc
cacagcagcatcgagaaggcggcgctgctcgccggtttcggccgcgatcatctgcgcctc
atcgagaccgacgacgaccacgcgatccggctcgatctgctggaagcggccatcgccgag
gatgtgcgccgcggcttgcgcccctgcgccgtcatcgcctgcatcggcaccacgggcacc
accgccgtcgatccgctggcgaaaatcgccgacatcgctgcgcgcttcggcccgtggctc
cacgtcgacgccgcaatggcgggcaccgcgatggtgctgcccgaatgccgcgaccactgg
acgggtatcgaacgcgccgactcgctggtcttcaatccgcacaagtggatgggcgtcggc
ttcgacttcagcgcctattacgtgcgcgacccggagcatctgatccgcgtcatgagcacc
aatccgagctatctccagacgaagcaggacggcgcggtgaagaattaccgcgactggcat
atccagctcggccgacgcttccgcgcgctcaagctctggttccatctcatggatgtgggt
gtcgagggcgtgcaggcgctcgtgcggcgcgaccttggcaatgcgcaatggttcaaggac
cgggtcgacgccgctgccgattgggaacgcctcgcgccggtgccgtttcagaccatctgc
gtccgccatgtccccgccgcgctcaagggcgacgaggccgcgctgaaggcgcacaatctg
gaattggcgcgaagggtgaatgaaggcggcgaggcctacatcacgcccgccctcctcaag
gggaagcagatcctgcgagtgagcatcggcgcaaccgcgaccgagcgcgcggaggtgcaa
gcgctgtgggtgctgctgaacgaggcggccgctccttaa
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