Rhodomicrobium vannielii: Rvan_3239
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Entry
Rvan_3239 CDS
T01353
Name
(GenBank) protein of unknown function DUF224 cysteine-rich region domain protein
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00630
Glyoxylate and dicarboxylate metabolism
rva01100
Metabolic pathways
rva01110
Biosynthesis of secondary metabolites
rva01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rvan_3239
Enzymes [BR:
rva01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
Rvan_3239
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Gene cluster
GFIT
Motif
Pfam:
CCG
Fer4_8
Fer4_7
Fer4_17
Fer4_10
Fer4_6
Fer4_16
Fer4_4
Fer4
Fer4_9
Fer4_2
Fer4_18
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ADP72434
UniProt:
E3I247
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All DBs
Position
complement(3530231..3531589)
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AA seq
452 aa
AA seq
DB search
METNFTLAQLRDPRMKEADAILRKCVHCGFCIATCPTYLMLGDERDSPRGRIYLIKTMLE
GKATPKQIRPHIDRCLSCYSCMTTCPSGVDYRHLSDYARQIIETSSTRAPGDEAIRKLIR
TVLPYPKRFRTALAGVFLALPFRRLLMRSRFKTIGAMLSLAPRSRVRSGVYTHAETVKTE
KPRRGRVLLLRGCVQRVLKPGINDSTVRFLNHIGYDVVLSEGEGCCGSLTLHMGKEAEAK
ALAKVNIDVWHDARKNGPIDAIVINASGCGSTVKDYAHLFADDPAYADKARYVSSLAKDV
SEFAALQKIDAPVGWSDIRVAYQSSCSMQHGQRVIEEPRQLLRNAGFTVVEIPEGHICCG
SAGTYNMLQPDLAKELRERKLQAIASVKPDVVASGNVGCISQLAGPFPIVHTVELLDWAY
GGPCPEPLKHLESRVRPLPREGESVEAEGALA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaacttcaccctcgcgcagcttcgcgatccccgcatgaaggaggccgacgcc
atccttcgcaaatgcgtgcattgcgggttctgcatcgcgacatgcccgacttatctgatg
ctcggcgacgagcgcgacagcccgcgcgggcgcatctatctcatcaagacgatgctcgaa
ggcaaggccacgccgaagcagatacgcccgcatatcgatcgctgcctctcgtgctattcg
tgcatgacgacttgcccgagcggcgtggactatcggcacctgtccgattatgcgcgccag
atcatcgagacatcttccacccgcgcgccgggagacgaggcgatccgcaagctcatccgc
acggtgctgccctatccgaagcggttccgcaccgcgctcgccggtgttttcctcgcgctt
cccttccggcggctgctgatgcgttcccgcttcaagaccatcggcgcgatgctgagcctt
gccccacgaagccgcgtcaggagcggcgtctatacccatgcggagacggtgaagacggag
aagccgcgccgtggccgcgtcttgctgctgcgtggctgcgtgcagcgcgtgctgaagccg
ggcatcaacgattcgaccgtgcgcttcctgaaccacatcggttatgacgtggtgctttcg
gaaggcgagggctgttgcggctcgctcacgctgcacatgggcaaggaggccgaggcgaag
gcgctcgcgaaggtcaacatcgacgtgtggcacgacgcccgcaagaatggtcccatcgac
gccatcgtcatcaacgcatcgggctgcggttcgaccgtgaaagattacgcgcatctgttc
gccgacgatccggcctatgcggacaaggcgcgctatgtttcgagcttggcgaaggatgtt
tccgagtttgcggccttgcagaagatcgacgcacccgtcggctggagcgacatacgcgtc
gcctatcaatcgtcgtgctcgatgcagcatggccagcgcgtgatcgaggaaccgcgtcaa
cttctgcgcaacgcgggctttaccgtcgttgaaatcccggaagggcacatttgctgcggc
tcggcgggcacctacaacatgcttcagccggatctcgcgaaggaactcagggagcgcaag
cttcaggccatcgcgagcgtgaaacccgatgtcgtggcgagcggcaatgtgggctgcatc
agccagctcgcggggccgttccccatcgtgcataccgtggagcttctggactgggcgtat
ggcgggccatgccccgagccgctgaagcatctcgaaagccgcgtccggccgcttccgcgc
gagggtgaaagcgtcgaagcggagggcgcgcttgcataa
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