Rhodomicrobium vannielii: Rvan_3342
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Entry
Rvan_3342 CDS
T01353
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rva03032
]
Rvan_3342
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_3342
Enzymes [BR:
rva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rvan_3342
DNA replication proteins [BR:
rva03032
]
Prokaryotic type
DNA Topoisomerases
Rvan_3342
DNA repair and recombination proteins [BR:
rva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rvan_3342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADP72527
UniProt:
E3I2T2
LinkDB
All DBs
Position
3638763..3641588
Genome browser
AA seq
941 aa
AA seq
DB search
MADPSDGNKGDRGAGDIRPILITDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFS
MSENGYSWNKPYRKSARIVGDVIGKYHPHGDQSVYDALVRMVQDFSMRVPLIDGQGNFGS
VDGDPPAAMRYTEVRLQKISDSLLNDLENDTVDFQDNYDNSEREPTVLPARFPNLLVNGA
GGIAVGMATNIPPHNLGEVIDACLAFLENPALSIEQLMEHIPGPDFPTGGVIMGRAGIRA
AYLKGRGSVVVRGKVHVETIRKDRDALIVTEIPYQVNKATLQERIAELVREKRVEGISDV
RDESDRSGYRVVIELKRDAMPDVVLNQLYRFTSLQSVFAANMVALNSGRPEQHTLLDFIQ
AFTQFRETVITRRTKFLLGKARDRAHVLVGLATAVANIDEVIKLIRSAPDPASAREALMS
RDWPADDIAPLLLLIEDPRSRIHEGNVYRLSIDQAKAILELRLQRLTALGRDEIADELKA
LADKIRDYLNILSSRARVISIVRDELTAIKEEFATPRRTEILDVEGEVDDEDLIQKEDMV
VTVSHRGYIKRVPLSTYRAQRRGGKGRSGMTTRDEDFVTRLFVANTHTPVLFLSSRGMAY
KMKVWRLPLSAPQARGKALINLLPLQQDETITSILPLPEERDESGVFILFATRSGNVRRN
ELADFAEVRQNGKIAMKLDPGDDIAGAQLCRETDDILLTTANGQAIRFPVTDVRIFKGRE
STGVRGVRLDEDDTVISLAILRHMNATPAERAAYLKQANAMRRAAAGERAATEGDIVEQE
AAAAAEAVEALDDGEAIESTDIADLTPARYGEMGAAEQYVLTMSERGFGKRTSSYEYRTS
GRGGKGIIAMAVNERNGRLIASFPVEDTDQIMLVTNGGKLIRCPIEGISITGRSAQGVTI
FRTDQDERVVSAELISDDGTGNGNGDGPDAGGDAEGEEPTE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
ttggcagatccgtcagacggcaacaagggcgatcgcggagcgggggacattcgtcccatc
ctcatcaccgacgagatgaagcgctcctatctcgattacgcgatgagcgtgatcgtgtct
cgcgcgctgcccgacgtgcgcgacgggctgaaacccgtccatcgccgcatcctcttctcg
atgagcgagaacggctactcctggaacaagccctaccgtaaatccgcgcgcatcgtcggc
gatgtcatcggtaaatatcatcctcacggggatcagtctgtttacgacgcgctcgtccgc
atggtgcaggacttttccatgcgcgtgcccctgatcgatggtcagggcaatttcggctcg
gtcgatggcgatccaccggcggccatgcgttacaccgaggtacgcctccagaagatctcc
gactccctgctcaacgaccttgagaacgacacggtcgattttcaggacaactacgacaat
tcagagcgcgagccaacagtgctgcccgcgcgcttcccgaacctcctcgtcaacggcgcg
ggcggcatcgccgtcggcatggcgacgaacatcccgccgcacaatctcggcgaagtcatc
gacgcctgcctcgcctttctcgaaaatcccgcgctcagcatcgagcagctcatggagcac
attcccgggccggacttcccgaccggcggcgtgatcatgggccgcgcaggcatccgcgcc
gcctatctcaaaggtcgcggctccgtcgtcgtgcgcggcaaggtgcatgtcgaaacgatc
cgcaaggatcgcgatgcgctgatcgttaccgaaatcccctatcaggtgaacaaggcgacg
cttcaggagcgcatcgccgaactcgtgcgcgaaaagcgcgtcgaaggcatttccgacgtg
cgcgacgagagcgaccgctcgggctatcgcgtcgtcatcgagctgaagcgcgacgccatg
ccggacgtggtgctgaaccagctttaccgcttcacatcgctgcaatcggtgttcgccgcc
aacatggtggcgctcaacagcggccgcccggaacagcacaccctcctcgacttcatccag
gctttcacgcagttccgcgaaaccgtcatcacgcggcgcacgaaattcctgctcggcaag
gcgcgtgatcgtgcgcatgtgcttgtcggcctcgccaccgccgtcgccaatatcgacgag
gttatcaagctcatccgctccgcgccggaccccgcgagcgcgcgcgaggcgctcatgtcg
cgcgactggcccgcggacgatatcgcgccattgctgctcctcatcgaagatccgcgctcg
cgcatccacgagggcaacgtctaccgtctgtccatcgatcaggcgaaggcgatcctcgaa
ctgcgcctgcagcgcctgaccgcgctaggccgcgacgaaatcgccgatgaacttaaggcg
cttgccgacaagatccgcgactatctcaatatcctctcttcgcgcgcccgcgtgatctcc
atcgtccgcgacgaactcaccgccatcaaggaagagttcgccacgccacgccgcaccgaa
atcctcgatgtcgagggcgaggtcgacgacgaagacctgatccagaaagaggatatggtc
gtcaccgtcagccatcgcggctacatcaagcgcgtgccgctgtcgacctatcgggcgcaa
cgtcgcggcggcaagggccgctccggcatgacgacgcgcgatgaggatttcgtcacgcgc
ctgttcgtcgcgaatacccacacgcccgtgctgttcctctcctcgcgcggcatggcttac
aagatgaaggtctggcggctgccgctgtccgccccgcaggcgcgcggcaaggcgctcatc
aacctgctgccgcttcagcaggacgagacgatcacctccatcctgccgctgcccgaggag
cgcgatgagtccggcgtcttcattctattcgcgacgcgctccggcaatgtgcggcgcaac
gaactcgccgacttcgcggaggtccgccaaaacggcaagatcgcgatgaagctcgatccg
ggcgacgatatcgccggcgcgcagctctgccgcgagaccgacgacattctcctcacgaca
gccaacggtcaggcgatccgcttcccggtgacggacgtgcgcatcttcaagggccgcgag
tcgaccggcgtccgcggcgttcgccttgatgaggacgacaccgttatttcgctcgccatc
ctccggcatatgaacgcgacgcccgccgagcgcgccgcctatctcaagcaggcgaacgcc
atgcgccgcgccgccgccggtgaacgcgccgctaccgagggcgacatcgtcgagcaggag
gccgcagcggccgccgaggcggtggaagccctcgacgacggcgaggcgattgaaagcacc
gacatcgccgatctcacgcccgcgcgttatggcgaaatgggcgcggccgagcaatatgtg
ctgaccatgtcggagcggggcttcggcaaacgcacatcgtcctacgagtaccggacgtcg
ggtcgcggcggcaaaggcatcatcgccatggccgtcaacgagcgaaacggccgcctcatc
gcgtccttccccgtggaagacacggaccagatcatgctcgtgacgaatggcggcaagctg
atccgctgccccatcgaaggcatctcgatcaccggccggtccgcgcagggcgtcacaatc
ttccgcaccgatcaggacgaacgcgtcgtctcggccgaactcatcagcgatgacggaacc
ggcaacggcaatggcgacggcccggatgccggcggcgatgccgagggcgaggaaccaacc
gaatga
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