Rhodomicrobium vannielii: Rvan_3364
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Entry
Rvan_3364 CDS
T01353
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
rva
Rhodomicrobium vannielii
Pathway
rva02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rvan_3364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rva03000
]
Rvan_3364
Transcription factors [BR:
rva03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rvan_3364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
AAA
AAA_2
GAF_3
HTH_50
Mg_chelatase
bpMoxR
AAA_16
nSTAND3
AAA_3
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ADP72549
UniProt:
E3I2V4
LinkDB
All DBs
Position
complement(3664843..3666510)
Genome browser
AA seq
555 aa
AA seq
DB search
MDDTLVLDLDMGSPVDDFTHCFTGECRANVLPILYRLNRAISSAQDLTEPLRIILDVMRE
TLRMHRGAITLYDRQSETIFIHDSFGLTDEQKQRGIYSLGEGVTGKVVESGKLIVVPRLH
DSTDFLDRTKAHEDRKHPKATFFCVPILLGQRVLGAIGAERVYLNPHLFKQDAEFLAAIA
LMIAPAVELYLIANNDKVRLENENRRLKNALKERYKPKNIIGNSKPMVEEVYNLIGKVAS
TRATILILGESGVGKELVANAIHYNSASADGPFVKFNCAAIPEALAESELFGHEKGSFTG
ALQTHKGSFEQADGGSIFLDEVGELSLTVQAKLLRVLQDRTVERVGSGKSIKVDLRIIAA
TNRNLPEMVENGLFREDLFYRLNVVPITVPPLRERGSDVILLADYFVAKSCEANGRSVKR
ISTPALNMLMAYHWPGNVRELENVIERAVILSDDEVIHAYNLPPSLQTPKESGTGFGVGL
EEKVRAVEYEMIVEALKSSNGNIGTAAQELGLTRRMLGVRMEKYGINYKNFRSGAYKPQN
GSGSERSDKVNAGIR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacactggtactcgacctcgacatgggttcgcccgtcgatgacttcacgcat
tgcttcaccggcgagtgccgcgcgaacgtcttgccgatcctctacaggctgaaccgcgcg
atttcttccgcgcaggatctgaccgagccgctgcgcatcatcctcgacgtcatgcgcgag
acgctgcgcatgcatcgcggcgcgatcacgctttacgaccgccagtccgagacgatcttc
atccacgacagctttggcctcaccgatgagcagaagcagcgcggcatctattcgcttggc
gaaggcgtcaccggaaaggtggtggaaagcggcaagctcatcgttgtgccgcgcctgcat
gacagcaccgatttcctcgaccgcacgaaggcgcacgaggaccgcaaacacccgaaggcg
acatttttctgcgtgccgatcctgctcggccagcgcgttctcggagccatcggcgcggaa
cgcgtctatctgaacccccatcttttcaagcaggacgcggaatttctcgcggccatcgcg
ctcatgatcgcgccggccgtcgagctttatctcatcgcgaataacgacaaggtgcggctc
gaaaacgagaatcgccgcctcaagaacgcgctgaaggagcgttacaagccaaagaacatc
atcggcaattccaagccgatggtggaggaggtctataacctcatcggcaaggttgcctcg
acgcgcgcgacaatcttgatcctcggcgaaagcggtgtcggcaaggagttggtggcgaac
gccattcactataatagcgcaagcgccgacggcccgttcgtgaagttcaactgcgccgcg
atccccgaagcgctcgccgagagcgagttgttcggccacgagaagggctcgttcaccggc
gcgcttcagacgcacaagggcagtttcgagcaagcggacggcggctcgatctttctcgac
gaggtcggcgaactgagcctcaccgtgcaggcaaaactcttgcgcgtgcttcaggatcgc
accgtcgagcgcgtcggcagcggcaaatccatcaaggtcgatctgcgcatcatcgccgcg
acgaaccgcaatcttcccgagatggtggaaaacggcctgttccgcgaagacctgttctat
cgcctcaacgttgtgccgatcaccgtgccgccgcttcgtgagcgcggctcggacgtgatc
ctgctcgccgattatttcgtcgcgaagtcctgcgaggccaacgggcgcagcgtgaagcgt
atctcgacgcccgcgctgaatatgctgatggcgtatcattggcctggaaatgtgcgcgaa
ttggaaaatgtcatcgagcgcgcggtcatcctctccgatgacgaggtgatccacgcctac
aatttgccgccctcgctgcagacgccgaaggaaagcggcacgggcttcggtgtcgggctt
gaagaaaaggtgcgagcggtcgaatacgagatgatcgtcgaggcgctgaaaagctccaac
ggtaacatcggcacggccgcgcaggagcttgggcttacgcgccggatgctcggcgtgcgg
atggagaaatacggcatcaattacaagaacttccgctcgggcgcgtacaagccgcagaat
ggaagcgggagcgagcgctccgacaaggtgaacgcgggcatacgttag
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