Rhodomicrobium vannielii: Rvan_3540
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Entry
Rvan_3540 CDS
T01353
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rvan_3540
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rva01007
]
Rvan_3540
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rva03016
]
Rvan_3540
Enzymes [BR:
rva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Rvan_3540
Amino acid related enzymes [BR:
rva01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Rvan_3540
Transfer RNA biogenesis [BR:
rva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Rvan_3540
Prokaryotic type
Rvan_3540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
Aq_1974-like
Motif
Other DBs
NCBI-ProteinID:
ADP72719
UniProt:
E3I470
LinkDB
All DBs
Position
complement(3850477..3852021)
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AA seq
514 aa
AA seq
DB search
MSQHALSVTREQNFPEWYQAVVRDADLAENSPVRGCMIIKPWGYGIWERVQKGLDARIKE
TGHENCYFPIFIPMSFLAKEAEHVEGFAKEMAVVTHHRLKNIDGKLVPDPEAELQEPLIV
RPTSETIIGDAFQRWVKSYRDLPILINQWANVVRWEMRTRMFLRTTEFLWQEGHTAHADK
TDAMAETLRMLEVYRSFAEDVLAMPVVAGEKPENERFPGADNTYSIEAMMQDGKALQAGT
SHYLGTHFAEAQNIRFQNEAGELALCHTTSWGVSTRLIGGVIMTHGDDDGLRLPPAIAPK
QIVIVPMLRDKPEDAAVVEFCTSLAAELNAKAAFGEPIRAHIDNRKIKSADKRWDWVRRG
APLILEIGPRDASGGNVTFTRRDALRDGPKVKSHSLPRAEFVAGAEGLLREIQGALYADA
KKRLDGNIRTDIASFDELAAYFGPAEEDEGGAFKGWVRVSWSRPTGAALEEIADRLKALK
LTIRNTPLDSKTSAATCFFTGGAAVEDIIISRAY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcacgccctttccgtaacgcgcgaacagaattttcccgagtggtatcaggcc
gtcgtccgcgatgccgacctcgcggaaaattcgcccgtgcgcggctgcatgatcatcaag
ccgtggggctatggcatctgggagcgcgtgcagaagggcctcgacgcgcgcatcaaggag
acggggcacgaaaactgctatttccctatcttcataccgatgagcttcctcgccaaggaa
gcggagcacgtcgaaggcttcgcgaaggaaatggcggtcgtcacgcatcaccgcctgaag
aacatcgacggcaagctggtgcccgatcccgaagccgagcttcaggaaccgctgatcgtg
cggccgacgtcggaaacgatcatcggcgacgccttccagcgctgggtcaagagctaccgc
gaccttcccatcctcatcaaccagtgggcgaacgtggtgcgttgggagatgcgcacgcgc
atgttcctgcgcacaacggaatttctctggcaggagggccacaccgcgcacgccgacaag
accgacgccatggccgagacgctgcggatgctggaagtctaccgcagcttcgccgaggat
gtgctcgcgatgccggtggttgccggtgaaaagccggagaacgagcgcttccccggcgcc
gacaacacctattcgatcgaagccatgatgcaggacggcaaggcgcttcaggccggcacg
tcgcattatctcggcacgcatttcgccgaggcgcagaacatccgcttccagaatgaggcg
ggcgagctcgcgctgtgccacacgaccagctggggcgtgtccacgcggctcatcggcggc
gtaatcatgacgcatggcgacgacgacggcttgcgcctgccgcctgccatcgcgccgaag
cagatcgtcatcgtgccgatgctgcgcgacaagccggaagacgctgccgtggtcgaattc
tgtacgagcctcgcggcggagcttaacgccaaggccgcgttcggcgagccgatccgcgcg
catatcgacaatcgcaagatcaagtccgccgacaagcgttgggactgggtgcgccgcggc
gcgccgctcatcctcgaaatcggcccgcgcgacgcaagcggcggcaacgtcacgttcacg
cgccgcgatgccctgcgcgacggccccaaggtcaaatcgcattcgctgccgcgcgccgag
ttcgtcgcgggcgccgaagggctgctgcgcgaaatccagggcgcgctttacgccgacgcc
aagaagcgcctcgacggcaacatccgcaccgacatcgcgagcttcgacgagctggccgcc
tatttcggcccggccgaggaggacgagggcggcgctttcaagggatgggtgcgcgtgtcg
tggtcgcggccgaccggcgcggcgctcgaagagatcgcggacaggctcaaggcgctgaag
ctcaccatccgcaacacgccgctcgacagcaagacgagcgccgcgacatgcttcttcacc
ggcggcgctgcggtcgaagacatcatcatctcgcgggcttactag
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