Rahnella victoriana: J9880_00570
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Entry
J9880_00570 CDS
T07871
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rvc
Rahnella victoriana
Pathway
rvc03030
DNA replication
rvc03430
Mismatch repair
rvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J9880_00570 (holB)
03430 Mismatch repair
J9880_00570 (holB)
03440 Homologous recombination
J9880_00570 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvc03032
]
J9880_00570 (holB)
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_00570 (holB)
Enzymes [BR:
rvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J9880_00570 (holB)
DNA replication proteins [BR:
rvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J9880_00570 (holB)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J9880_00570 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF6925
DUF6587
Motif
Other DBs
NCBI-ProteinID:
UHM90905
LinkDB
All DBs
Position
complement(104870..105889)
Genome browser
AA seq
339 aa
AA seq
DB search
MNWYPWLTGPYRQLTGQYQTGRGHHAVLMHAAAGIGDEALVYGLSRWLLCQHKDGEKSCG
TCHSCQLMIAGNHPDWHILQPEKGKNSLGIDPVRQLIETLYNYSQQGGAKVVWIPQTELL
TEAAANALLKTLEEPPAGTYFLLGCREPSSLLATIRSRCFYWHLPVPDEALAIQWVNRQL
SADPIAIKTALRLTNGAPLSAMELLQPERWKQRVALCQQLYVQCQQHDMLSLLPQLNHDD
AAERLYWLATLLLDAIKWQQHAGQFIINHDQQPLIAMLAGAQSNASLQQSVTAWMHCRQQ
LLSIVGVNRELLLTEQLLEWEQILQGKTPSSFFSAALTR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtatccgtggctcaccggcccgtacagacaactgaccgggcaataccagacg
gggcggggtcatcacgcggtgctgatgcatgcggcggcgggcatcggcgatgaggcactg
gtgtacggtctgagtcgctggttgctttgccagcacaaagacggcgaaaaaagttgcggc
acctgtcatagctgccagctgatgatcgccggaaaccatcccgactggcatatcctgcaa
cctgaaaaaggcaaaaactcactgggtatcgatccggtgcgtcagctgattgaaacgttg
tacaactattcgcagcagggcggcgcaaaagtcgtgtggatcccgcagactgaattgctg
accgaagccgcagccaatgctttactgaaaacgctggaagagcctccggcgggtacctat
ttcctgctcggttgccgtgaaccttcgtctttgctggcgactatccgcagccgttgtttc
tactggcacctgccggtgcctgatgaggcgctggcgatccaatgggtcaaccgccagctc
agcgccgatcccatcgcgattaaaaccgcactgcgcctgaccaacggtgcgccgttgtct
gcgatggaactgttacagcctgagcggtggaagcaacgcgtggcgctttgccagcagctt
tacgttcagtgccagcaacacgatatgctttccctgttaccgcaactgaatcacgacgat
gccgcggagcgcctgtactggctggcgacgctcctgctggatgccatcaaatggcagcag
cacgcagggcagttcatcatcaatcacgatcagcagccgctgattgcgatgctggccggt
gcgcaatctaatgcgtcgctgcaacagtccgtcaccgcctggatgcattgtcgtcagcaa
ctgctttccatcgtgggtgtaaaccgcgagctgctgttgaccgaacagttgctggaatgg
gaacagatcctgcagggcaagacaccctcttcatttttcagtgctgctctgacgcgctga
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