Rahnella victoriana: J9880_00960
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Entry
J9880_00960 CDS
T07871
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rvc
Rahnella victoriana
Pathway
rvc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_00960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_00960
Transporters [BR:
rvc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
J9880_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UHM90975
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All DBs
Position
178174..179814
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AA seq
546 aa
AA seq
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MKNIRRINAVTRALALGALLTSTFSVLAADGTPVQGGTLIYLEQQAHTNLYPPAGGFYPN
GGILNQITDKLTYQNPKTLEIEPWIAESWSFNADKTEYTFKLRPGVTFSDGTPLDASAVA
KNFDTYGLGNKAHHLPVSEVINNYDHSEVVDPLTVKFYFKKSSPGFLQGTATIGSGLVSL
STLDRNFDALGDATHIIGSGPFVVSKETLGREVDLTARKDYHWGPKNLKQQGRANLDGIK
VIVTGEDSVRIGALLAGQADFIRQVQAYDEKQAKDQNFPIYAAPTKGVNDSISFRPDNAL
VSDLKVRQALLHATNSKQVVDTLFSPNYPQATSVIAKTAAGYVDLSNKLTYDPTLSKKLL
DEAGWKPGPNGIRQKDGKTLSLTIYESLPQPQNKEVLQLVSQQWSQVGAKLNILAGDAGS
RVADNLDPEKTPANVVEVGRADPDVIKSSFYPTNRDALLQKGGLSSKVNNFRDDKLNDLL
TAISAEVDPKKRLALTGDVQNYLLDQAYVIPIFEEPQVFAGAPYFKGVSFEAVGRPSFYG
AWLEKH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacattcgccggattaacgcggtgacccgcgcactggctttaggggcacttctc
accagcacgttttctgttctcgccgctgacggcacaccggtacagggcggcaccctgatt
tatctggaacaacaggcgcacaccaacctgtatccgcccgctggcggcttctacccgaac
ggcggcatcctgaatcagatcaccgacaaactgacctatcagaatccgaagacgctggaa
atagaaccctggatcgccgaatcctggtcgttcaatgccgacaaaaccgagtacaccttc
aaactgcggccgggcgtgaccttctctgacggcacgccgctggatgccagcgcggtggcc
aaaaactttgatacttacggtctgggcaataaagcgcatcacctgccggtctccgaagtc
atcaacaattatgaccacagcgaagtggtcgatccgctgaccgtgaagttctatttcaaa
aaatcctcgccgggcttcctgcagggcaccgcgaccattggctccggtctggtatcgctg
agcacgctggatcgcaactttgatgcgctgggcgacgccacgcacatcatcggttccggc
ccgttcgtggtcagcaaagaaacgctgggtcgcgaagtcgatctgaccgcgcgtaaggat
taccactgggggccgaaaaacctcaaacagcaaggtcgcgccaatcttgacggcatcaaa
gtgatcgtcaccggcgaagacagcgtgcgtatcggcgcgctgctggcgggtcaggcagat
ttcatccgtcaggttcaggcgtatgacgagaaacaggccaaagaccagaacttcccgatt
tatgccgcgccgaccaaaggtgtcaacgacagcatttcgttccggccggacaacgcgctg
gtatccgatctgaaagtgcgtcaggcgctgctgcacgccaccaacagcaaacaggtggtc
gatacgctgttctcgccgaactatccgcaggccacctctgtgattgccaaaacagcggcc
ggttatgtcgatctgagcaacaagctgacctacgacccgacgctgtccaaaaagctgctg
gatgaagcgggctggaaaccgggtccgaacggcatccgccagaaagacggcaaaacgctg
tcgctgaccatttatgaatccctgccacagccgcagaacaaagaggtgttgcagctggtc
tcccagcaatggagtcaggtcggcgcaaagctgaatattctggcgggcgatgcgggcagc
cgcgtggcggataaccttgatcccgagaaaaccccggccaacgtggtggaagtcggacgc
gccgatccggacgtgatcaaaagctccttctacccgaccaaccgcgatgcgctgctgcaa
aaaggcggcctgagcagcaaggtgaacaacttccgcgacgacaaacttaacgacctgctg
accgccatttcagccgaagtcgatccgaaaaaacgtctggcactgaccggcgacgtgcag
aactacctgctggatcaggcgtatgtcattccgattttcgaagagccgcaggtgtttgcc
ggtgcgccgtatttcaaaggcgtcagctttgaagcggtcgggcgtccgagcttctacggc
gcatggctggaaaagcattaa
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