Rahnella victoriana: J9880_01750
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Entry
J9880_01750 CDS
T07871
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00550
Peptidoglycan biosynthesis
rvc01100
Metabolic pathways
rvc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J9880_01750 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9880_01750 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rvc01011
]
J9880_01750 (mrdA)
Enzymes [BR:
rvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J9880_01750 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rvc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J9880_01750 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UHM91114
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All DBs
Position
338024..339928
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AA seq
634 aa
AA seq
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MKIDRNPFRDYTAESALFVRRALVAFIGILLLSGVLAFNLYNLQIVRFQDYQTRSNDNRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELVPEKVDDLQATLEGLKPIVDLTPEDIDNF
KKERQRSRRFTSIAVKTALTEVQVARFSVNQFHFPGVEVKGYQRRYYPYGSALTHVIGYV
SKINDRDVERLDKDGILANYAATHDIGKLGIERYYEDTLHGKTGYEEVEVNNRGRVIRQL
HEEPPQAGKDIYLTIDLPLQKYIEELLTGSRAAVVVTDPRDGAIRALVSNPSYDPNLFVD
GISSKDYSGLLNDPNKPLINRATQGVYPPASTVKPYIAVSALTSGVITKNTSLFDPGWWQ
LPGSDKRYRDWKHWGHGRLNVTKSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYSGI
DLSEERSGNMPNRDWKFKRFKKPWYQGDTIPVGIGQGYWTATPIQIMKAMTTLINDGNVK
TPHLLLSTKVEGKQVPYQQQETTQIGDIHSGYWEIAKDGMYGVANRPNGTARKYFADAPY
KAAAKSGTAQVYGLKANEIYNAHKIAEHLRDHKLMTSFAPFDKPTVAVAVVLENGGAGPA
VGTISRQILDHILLGDNTTQLPADAPAPPGTEGD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagatcgtaacccttttcgcgactatacggctgaatcagccctctttgtgcgc
cgtgcactggtggcgttcatcggcattctgctacttagcggcgtcttagcctttaatctc
tataatctgcaaatagtccgttttcaggattaccaaacccgttctaatgataaccgtatc
aagctggtgcccatcgcgcccagccgcgggattatctacgatcgcaatggcaccccgctg
gccctgaaccgcaccatttaccagctggaactggtgccggaaaaagtggacgatttgcag
gccacgcttgaaggtctcaagccgattgtcgatctcaccccggaagatatcgataacttc
aaaaaagagcgccagcgttcacgacgctttacctctattgcggtcaaaacggccctgacg
gaagttcaggtcgcgcgtttctccgtcaatcagttccatttccccggcgttgaagtcaaa
ggctatcagcgtcgctattacccgtacggttctgcactgacgcacgtcatcggctatgtg
tcgaaaatcaatgatcgtgacgttgagcgtctggataaagatggcattctggccaactac
gccgccacacacgatattggcaagctgggcatcgagcgttattacgaagacacgcttcat
ggcaaaacaggctatgaagaggttgaggtcaataaccgcgggcgcgtcatccgccagttg
cacgaagagccaccgcaggccggtaaagacatttacctgaccattgacctgccgttgcag
aaatacattgaagaattgctgaccggcagccgtgccgccgtcgtggtcaccgatccgcgc
gatggcgcgatccgtgcgctggtctccaacccgagctatgacccgaacctgtttgtggat
ggcatatcgagcaaagattacagcggcttgttaaacgatccgaacaaaccgctgatcaac
cgggcgacgcagggggtttacccgccagcgtcgacggtgaaaccctatattgccgtctcc
gcgctcacctctggcgtgatcaccaaaaacacctccctgtttgatccgggctggtggcag
ttgccgggttctgataaacgctaccgtgactggaaacactgggggcatggccgcctgaac
gtcaccaaatcccttgaggaatcggccgataccttcttctatcaggtggcctatgatatg
ggcatcgaccggctgtcagaatggatgggcaaattcggatacggtcattacagcggcatc
gatttgtcggaagagcgcagcggcaatatgccaaaccgcgactggaagtttaaacgcttc
aagaaaccctggtatcagggtgacaccattccggtggggatcggtcagggctactggacc
gcaacgccaatacaaatcatgaaagcgatgaccaccctgattaacgacggcaatgtgaaa
acgccgcatttgttgctgagcacgaaagtggaagggaagcaggtcccttatcagcagcag
gaaaccacccagattggggatatccattccggttactgggaaattgccaaagacggcatg
tacggcgtggctaaccggccgaacggcaccgcacgcaaatattttgccgatgccccttac
aaagcagcggcaaaatccggtaccgcacaagtttacggtttgaaagccaatgaaatctat
aatgcgcataagattgctgagcatctgcgcgaccacaaactgatgacctcgtttgccccg
ttcgacaaacctacggtggcggtggctgtcgttctggagaacggcggtgcaggtccggca
gtggggacgatttcgcggcagatactcgaccatattttactgggcgacaacacgacacaa
ttaccggctgacgcgcctgcgccgccgggaaccgaaggtgattaa
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