Rahnella victoriana: J9880_02720
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Entry
J9880_02720 CDS
T07871
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_02720 (sbcD)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J9880_02720 (sbcD)
Archaeal homologous recombinant proteins
J9880_02720 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
UHM91294
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Position
546184..547422
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AA seq
412 aa
AA seq
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MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLTGQVQQHQVDAVIVAGDIFDTGSPPSYAR
ELYNRFVVELQQTGCQLVVLAGNHDSVATLNESRELLSCLNTRVIATVGENLAEQILVLR
QRDGTPGAVLCAIPFLRPRDLLASQAGQSGSDKQLALQEAIAAHYDALWQAAQAKRDELG
VPLPVIATGHLTTVGVSTSDSVRDIYIGTLDAFPAQAFPPVDYVALGHIHRAQCVAKTDH
IRYSGSPIALSFDELSKAKSVYLLDFEGATLNAIETLEIPVFQPMQIIKGSLAEIEKQLT
QFEGGDPAKPVWLDIEVSTQDYLSDIQRRIQALTADLPVEVVLLRRSKEQRINRIEQQEK
ETLSELSVGDVFERRLALEPDPDEPRQARMRTLFAQVVEQVTSGQNAEDSAQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacgtcagactggcacctcggccagtacttttttaccaaaagccgc
gctgccgaacatcaggcatttttgcgctggctgaccggtcaggtgcagcaacatcaggtc
gatgccgtgattgtcgcgggggatattttcgataccggatcaccgcccagttatgcccgc
gaattgtataaccgcttcgtggtggaattacaacaaaccggctgccagctggtggtgctg
gccggtaatcacgattctgtcgccacgctcaacgaatcccgcgaactgctttcctgtctg
aatacccgggtgattgccaccgtgggtgaaaacctggcggaacagattttagtgctccgt
cagcgagacggaacgcccggcgcggtgctgtgtgccattccgtttttacgtccgcgtgat
ttgctcgccagccaggccggacaatccggcagcgacaaacagctggcattacaggaagcc
attgccgcccattatgacgcgctgtggcaggccgcgcaggcgaaacgcgatgaactgggc
gtaccgctgccggtgattgccaccggccatctgaccaccgtcggcgtcagcacctccgat
tcggtgcgcgacatctatataggcacgctcgatgcgtttccggcacaggctttcccgccg
gtcgattatgtggcactcggccatattcaccgcgcgcagtgcgtcgccaaaaccgaccat
atccgctacagcggttcgccgattgccctgagttttgatgaactgagcaaggccaaaagc
gtctacctgcttgatttcgagggtgcgacactcaacgccatcgagacgctggaaatcccc
gttttccagccgatgcagatcatcaaaggctcgctggcggagattgaaaagcaactgaca
cagttcgaaggcggcgatccggcaaaacccgtctggctggatattgaagtctccacgcag
gattatctcagcgatattcagcgacgtatccaggcgctgacggcagatttgccggtagaa
gtggtgctgttacgccgcagtaaagaacagcgcatcaaccgcattgagcagcaggaaaaa
gaaaccctcagcgaactgagcgtcggcgatgtctttgaacggcggctggcgctggaaccc
gatcccgatgaaccgcgtcaggcgcggatgcgtaccttatttgcgcaggtggttgaacag
gtgaccagcggtcagaacgcggaggacagcgcacaatga
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