Rahnella victoriana: J9880_02725
Help
Entry
J9880_02725 CDS
T07871
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_02725 (sbcC)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J9880_02725 (sbcC)
Archaeal homologous recombinant proteins
J9880_02725 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
cobW
ABC_tran
AAA_21
nSTAND3
TsaE
AAA_14
AAA_27
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UHM91295
LinkDB
All DBs
Position
547419..550667
Genome browser
AA seq
1082 aa
AA seq
DB search
MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNITPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNSPDGNLQAPKVELALLAD
GKILADKVRDKLDTIASLTGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGLLSERVFEQHKEARITLDGLHQRMAGIELLSEEQRQTLEAQLAELNAQEISLSQQAHQ
RQQDLNWLQQWQQAQQKQQQSQQQLTAAEQENLAAAPQLQQLARSEPAEKLRPLLVDRQR
CQDESQRLQQWLTQLTQQQEQQIAQLTPLKQAEEQAQTARQTQAQAQRQMQTLIEEKILP
LDGDIALLRKSLAEMQQSAGDAQKQVAEQHAALVQITAERQKLDEESRQHQTRQTALTDA
LNSAQQRQAALEKQHPRAALQQRQTELIQLRPVRQQLFSLMQIFPQLNQRVLQQHNDAAQ
YQTQLAEEEQRLGAIRLQCQKQLDHLNDVKTLHKQEMLIVSLEAERASLQSGQACPLCGS
TSHPAIEHYQEVKPSETALRVEKMQLEFDAAKASGIELAAKIKSLKEQQTRLQSQLEQDQ
QQLNAHTAHWQQLSESLNLTFTLHDTADITQWLTARDDEEQQSQTLISQHEQLARALQQA
KDALNDALNAQQKVQQQSALLTERFTRLEETQAKSQEHLAKLQKQCAEGEKSLAELNARR
HELFGDRQVAQVRGHLHQQQQAAEKAVSDAQTALQKAQEQRDQLAGQLASTQQQQQQALA
RLTQAEQAWQQALGASGFADEDAVKQALLDDALRQQLQQRKEHLQQQLAQAQALLVDAKD
MLEKQRLARPSHLSEAGSDLHALTAQQAELAQQLKALQQRLGEVKNQLESDKQRHSGQQA
LIAQIAQAQLTCDDWGYLNQMIGSSDGAKFRKFAQGLTLDHLVYLANRQLEKLHGRYLLQ
RKTSDALELQVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSDKTRIDSLFLDEG
FGTLDADTLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVTKVNGLGVSRLSSEF
KV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtttaaaaaacctgaattcgctggaaggcgaatggaaaatt
gacttcaccgccgaaccttttgccagtaacggattgttcgccattaccggcccgaccggc
gcggggaaaaccaccctgctcgatgctatttgtctggcgctgtatcaccagacgccgcgt
ctgaacatcacgccaagccagaacgaactgatgacccgccacaccgccgaatcgctggcg
gaggtggagtttgaagtcaaaggcgtgggttaccgcgcattctggagccagcgccgcgcc
aaaaactcgccggacggcaacctgcaggcaccgaaagtggagctggcattgctggccgac
ggcaaaattctggccgataaagtgcgcgacaaactcgacaccatcgcttcactgaccgga
ctggattttggccgtttcaccaaatcgatgatgttgtctcaggggcagttcgccgcgttc
ctgaatgcagatgccaacgaccgcgccgaactgctggaagaactgaccggcaccgaaatt
tacggactgctgtctgagcgtgtgtttgagcaacataaagaagcgcgcattaccctcgac
ggcctgcatcagcgcatggcgggtatcgaactgctcagcgaagaacagcgccagacgctg
gaggcgcaacttgctgaactgaacgcgcaggaaatcagcctcagtcagcaggcacaccag
cgccagcaggatctgaactggctgcaacagtggcaacaggcacagcaaaaacagcagcag
tctcagcaacaactcaccgccgcagaacaggaaaatctggccgccgcgccgcagttacag
caactggcgcgcagtgaaccggcagaaaaactgcgtccgttactcgtggatcgccagcgt
tgtcaggacgaatcgcaacgccttcagcaatggctgacacaactgacgcagcagcaggaa
cagcagattgcgcagctgacgccgctgaaacaggcggaagaacaggcacaaacggcgcgg
cagacacaggcgcaagcacagcgccagatgcagacgctgatcgaggaaaagatcctgccg
ctggatggcgacatcgccctgctgcgtaaatcgctggctgaaatgcagcagtcggccggt
gacgcacagaaacaggtcgctgaacagcacgcggcgctggtgcaaatcacggcagaacgc
cagaaactggacgaagaaagccgtcagcatcagacccgccagaccgcactgaccgacgcg
ctgaacagcgcacaacaacgacaggcggcgctggaaaaacagcacccgcgggcggcattg
cagcaaaggcagactgaactcatccagctgcgcccggtgcgtcagcagctgttctcgctg
atgcaaattttcccgcaactgaaccagcgggtgctgcaacagcacaacgatgccgctcag
taccagacgcaactggctgaagaagaacagcgtctgggcgccatccgtctgcaatgtcag
aaacagctggaccatctcaacgacgtcaaaaccctgcataaacaggaaatgctgatcgtc
agcctcgaagccgaacgcgccagcctgcaaagcggccaggcctgtccgctgtgcggctcg
acatcgcatccggcaattgaacattatcaggaggtcaaaccttctgaaacggcgctgcgc
gtcgagaaaatgcagctggagtttgatgcggcgaaagccagcggcatcgaactggcagca
aaaatcaaaagcctgaaagagcagcaaacccgcctgcaaagccagctggaacaggatcag
cagcaactgaatgcgcataccgcacactggcagcagctcagcgaatcgctgaatctgacc
ttcacgctgcatgacaccgctgacatcacgcaatggctgaccgcacgcgacgacgaagag
cagcagtcacagacgctgatcagccagcacgaacagctggcacgggcgctgcaacaggcc
aaagatgccctgaatgatgccctgaacgcacagcagaaagtgcagcagcaaagcgcgttg
ctgactgaacgtttcacacggctggaagagacgcaggcgaaatcccaggaacatctcgcg
aagctgcaaaaacagtgcgctgagggtgaaaaatcactggcggaactgaacgccagacgt
cacgaactgttcggcgatcgtcaggtggcgcaggtacgcgggcacttacatcagcaacag
caggcggcagaaaaggccgtcagcgatgctcagaccgcgctgcaaaaggcacaggaacag
cgtgatcagcttgccggtcagctcgccagtacgcagcagcaacagcagcaggcgctggca
cgtctgacgcaggcggaacaggcgtggcaacaggcgctcggcgccagcggctttgcggat
gaggacgccgtaaaacaggcgttgctggatgacgcgttacgtcagcagcttcagcaacgt
aaagaacatctgcaacaacaactggcgcaggcgcaggccttgctggtcgacgccaaagac
atgctggaaaaacagcggcttgcccgcccctcgcatctcagtgaggccggcagcgatctt
cacgcgctgaccgcgcaacaggcggagctggcacaacagctgaaagccttacagcaacgt
ctgggtgaagtgaagaatcagctggaaagcgacaaacagcgtcacagcggacaacaggcg
ctgattgctcagattgcgcaggcgcagctgacctgtgatgactggggctatctcaatcag
atgattggctccagcgatggcgcgaaattccgtaaatttgcgcagggtctgacgctcgat
catctggtgtatctggccaaccgtcagctggaaaaactgcatggccggtatctgttgcag
cgtaaaaccagcgatgcgctggagttgcaggtggtcgatacctggcaggcggacgcggtg
cgcgacacccgcacgttatccggcggcgaaagtttcctggtcagtctggcactggcgctg
gcactgtcagatctggtcagtgataaaacccgcatcgactcgctgttccttgacgaaggg
ttcggcacgctcgatgccgacacgctggataccgcgctggatgccctcgacagtctgaat
gcctcaggtaaaaccatcggcgtgatcagccatgtcgaggcgatgaaagaccgtattccg
gtgcagatcaaagtcaccaaagtgaacggtctgggcgtcagccgcctgagcagtgaattt
aaagtctga
DBGET
integrated database retrieval system
