Rahnella victoriana: J9880_02960
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Entry
J9880_02960 CDS
T07871
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rvc
Rahnella victoriana
Pathway
rvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J9880_02960 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_02960 (ung)
Enzymes [BR:
rvc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J9880_02960 (ung)
DNA repair and recombination proteins [BR:
rvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J9880_02960 (ung)
Prokaryotic type
J9880_02960 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UHM91337
LinkDB
All DBs
Position
597731..598411
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AA seq
226 aa
AA seq
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MSSILTWHDVIGQEKEQPYFVDTLKFVAAERAAGKTIYPPQQDVFNAFRSTELADVKVVI
LGQDPYHGPNQAHGLSFSVRPGIPAPPSLVNMYKELITDIPGFERPVHGYLQSWADQGVL
LLNTVLTVEGGQAHSHAKLGWETFTDKVIAALNDNREGVIFLLWGSHAQKKGNIIDRNRH
HVLKAPHPSPLSAHRGFLGCKHFSQANNLLAQQGLAPIDWVPRLPE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattctcacctggcatgacgtgattggtcaggaaaaggaacaaccctatttt
gtggatacgctgaagtttgtggccgccgaacgcgccgcgggcaaaacgatttatccgccc
caacaggatgtcttcaacgcatttcgctcgacggaactggctgacgtcaaagtcgttatt
ctcgggcaggatccgtaccacggcccaaatcaggcgcacgggctttctttctccgtccgt
cccggcattccggcgccgccttctttagtgaacatgtacaaagaactgatcactgatatt
ccgggctttgagcgccctgtccatggctatttacagagctgggcagatcagggggtgtta
ttgcttaataccgtgttaacggtcgaaggcgggcaggcgcattcccacgccaaactgggc
tgggaaacctttacagacaaagtgattgccgcactgaacgataatcgtgagggcgtgatc
ttcctgctctggggatctcatgcgcagaaaaaaggcaatatcattgaccgcaaccgtcat
cacgtcctgaaagcgccgcacccttctccgctctcagcgcatcgcgggtttctgggctgt
aaacacttctcgcaggcaaataatttgctggcgcagcaaggtctggcaccgattgactgg
gtaccgcgattgccggaatag
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