Rahnella victoriana: J9880_03745
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Entry
J9880_03745 CDS
T07871
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvc03000
]
J9880_03745
Transcription factors [BR:
rvc03000
]
Prokaryotic type
Helix-turn-helix
Other families
J9880_03745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
UHM91486
LinkDB
All DBs
Position
complement(777510..778670)
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AA seq
386 aa
AA seq
DB search
MSAYHLDAKLAQQIVARTMQIIDSNVNVMDGRGRIIGSGDDQRLGELHEGALLSISQERI
VDIDEGVARHLHGVRPGINLPLRIDGQIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRVDELSPALMEWAQRLGIDLNRPRVAAVVEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSYDRWDPDGHRQRIDHLLSRMTE
TGRLRVRISLGNFFTGPGSIARSYRTARTTMTVGKQRMPEQRCYFYQDLILPVLLDSLRG
GWQADELVRPLARLKATDGNGLLRRTLTSWFHNNVQPTATSKALYIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDNDQL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtatcatctcgatgcaaagctggcgcaacaaattgttgcccgcacaatgcaa
attattgatagtaatgtgaatgtcatggatggccgcggaaggattatcggcagtggcgac
gaccagcgccttggtgaattgcacgaaggggctttactgtctatttcgcaggaacgtatt
gtcgatatcgacgaaggcgtggcaaggcatttgcacggtgtgcgtccgggcatcaacctg
ccgctgcgtattgatggccagatcgtgggcgtcattggtctgacgggcaatccgtctcag
ttgcgccagtacggcgaactggtgtgtatgaccgccgaaatgatgctcgaacaagcgcgt
ttgctgcatatgctggcgcaggacagccgtctgcgtgaagaactggtgctgaatttgatc
cgcgtggacgagctttctccggcgctgatggaatgggcgcagcgtctgggcatcgacctg
aaccggccgcgcgtcgctgcggtggtggaggtcgacagcggccagttgggtgtcgattcc
gcgatggccgagctgcaacagctgcaaaccctgctgaccacgccggagcgcgacaacctg
atcgccattgtctccctcaccgaaatggtggtgctgaaaccggcgctgaacagctacgat
cgctgggatccggacggccaccgccagcgcatcgatcatctgctttcccgcatgaccgaa
accggtcgtctgcgcgtacgcatttccctcggtaacttctttaccggccccggcagcatc
gcccgttcataccgcaccgcgcgcaccaccatgaccgtcggtaaacagcggatgccggaa
caacgctgctatttctatcaggatctgatcctgccggtgctgctcgacagcctgcgcggc
ggctggcaggccgacgaactggtgcgtccgctggcccgtctgaaagccactgacggcaac
ggattattgcgccgcacgctgacctcgtggttccacaataatgtgcagccgaccgccacc
tcgaaagccctctatattcaccgtaatacgctggaatatcgcctcaaccgcatctctgaa
ttaaccggtctggatctggggaatttcgacgatcgtttattgctgtatgtcgcgctgcaa
ttagataacgaccagttgtga
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