Rahnella victoriana: J9880_04180
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Entry
J9880_04180 CDS
T07871
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00470
D-Amino acid metabolism
rvc00550
Peptidoglycan biosynthesis
rvc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J9880_04180 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J9880_04180 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rvc01011
]
J9880_04180 (murD)
Enzymes [BR:
rvc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
J9880_04180 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rvc01011
]
Precursor biosynthesis
Amino acid ligase
J9880_04180 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
UHM91563
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Position
complement(876760..878076)
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AA seq
438 aa
AA seq
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MADYQGKKVVIIGLGLTGLSCVDFFVARGVTPRVIDTRVSPPGLDKLAENIECHLGSLNE
DWLLDADLIIASPGVALATPALSAAADAGVEIVGDIELFCRETQTPVVAITGSNGKSTVT
TLVGEMAKAAGWRVGVGGNIGLPVLTMLDHEYDLFVLELSSFQLETTHSLHAAAATILNV
TEDHMDRYPFGLQQYRAAKLKVYENAALCVVNADDALTMPVRGADKRCVSFGVDVGDYHL
TRQQDDIWLRVRGEKVLNTREMPLTGRHNYTNALAALALADAVGIPHASSLKALTTFTGL
AHRFQVAWQHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLTRYL
QGDNLRIYCFGRDGAELADLRPEVSSLFETMEQAMRDISTHVASGDMVLLSPACASLDQF
RSFEQRGDVFTALAKELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctgactatcagggtaaaaaagtggtcatcatcgggttgggtctcaccggcctgtct
tgtgttgatttctttgttgctcgtggcgtgacgccgcgtgtcattgatacccgcgtcagc
ccgccgggactggataaactggcggaaaatattgagtgtcacctcggttcgctcaatgaa
gactggctgctggacgctgatctgattatcgccagtccgggcgttgcgctggcaacaccg
gcactgagtgcggcggctgatgctggcgtggaaattgtcggcgatatcgaactgttttgt
cgtgaaacccagacgccggtcgttgcgattaccgggtcgaacggcaaaagcaccgtgacc
acgctggtcggtgaaatggcgaaagccgccggttggcgcgtgggcgtcggtggcaatatt
ggtttgccggtgctgacgatgctggatcacgaatacgatttgtttgtgctggagctttct
agcttccagctcgaaaccacgcacagtctgcatgcggcggcggccaccattctcaacgtg
actgaagatcatatggatcgctatccgtttggtttgcagcaataccgtgcggcaaaactg
aaagtgtatgaaaacgccgcgctatgtgtcgtcaatgccgatgacgccctgaccatgccg
gtgcgtggcgcggataaacgctgcgtaagctttggtgtcgatgtgggggattatcatctg
acccgccagcaggacgatatctggctgcgtgttcgtggcgaaaaagtcctgaatacccgt
gagatgccgctgaccggccgtcacaactacaccaatgcgctggcggcactggcgctggcg
gatgctgttggtattccacatgcttccagcctgaaggctctgacgacctttaccggtctg
gctcatcgtttccaggtcgcctggcagcataacggcgtgcgctggataaacgattctaaa
gcgaccaacgtcggcagcaccgaagcggcactgaacgggcttcacgtcgatggcacgctg
catctgttactgggcggcgacggaaaatctgctgatttctcaccgctgacgcgttacctg
cagggcgataacctgcgtatttactgcttcggtcgtgacggtgcagagctggcggatttg
cgtcctgaggtgtcttctctgtttgagacgatggaacaggcgatgcgggatatcagtacg
cacgtggcttccggcgacatggttttactgtcgccagcctgcgcgagtctggatcagttc
cgcagttttgaacaacgtggtgatgtctttaccgcactggcgaaggagctgggttga
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