Rahnella victoriana: J9880_04235
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Entry
J9880_04235 CDS
T07871
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00061
Fatty acid biosynthesis
rvc00071
Fatty acid degradation
rvc01100
Metabolic pathways
rvc01212
Fatty acid metabolism
rvc02024
Quorum sensing
rvc04146
Peroxisome
Module
rvc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J9880_04235
00071 Fatty acid degradation
J9880_04235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J9880_04235
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_04235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rvc01004
]
J9880_04235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvc04147
]
J9880_04235
Enzymes [BR:
rvc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J9880_04235
Lipid biosynthesis proteins [BR:
rvc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
J9880_04235
Exosome [BR:
rvc04147
]
Exosomal proteins
Exosomal proteins of breast milk
J9880_04235
Exosomal proteins of breast cancer cells
J9880_04235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UHM91574
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All DBs
Position
complement(890010..891806)
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AA seq
598 aa
AA seq
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MNPTLNDYHLITRFRQQVSARPEQTAFREWSPVAETALTWRELGEKVDALSDVLLQEQVG
VQERIAICGNNAMAWAMADLAILQLRAVTVPVYATNTPAQSAYVLNDADIRIMFVVGQKQ
YDTAVALRELCPQLKHILVLDNDVDLRGVPIARHVSGLIPQDAALAAEREVRVNACDLSD
LFTLIYTSGTTGEAKGVMLDYRSMATQLKQHEKRLSITDRDISLCFLPLAHVFERAWSFF
VMHCGAQNVFLRETDRVRDALQAIKPTVMCAVPRFYEKVFSAIHDKVARAGTIKKRLFHW
AVAQGKEKFLTERRGERYPFWLAPAHFLADKLVLKKLRDLLGGNLRFLPAAGASLDDNVI
LFFESVGLKIKYGYGLTETCATVTCWEENDFRFGSVGTALPEIEVRIGDENEIQVRGPTL
LRGYFNKPEETAASFTADGWFKTGDAGKMDAQGNVFITERLKDLMKTSGGKYIAPQRIEG
TLVQDRYIEQAAVIADERHFVSALIVPDFDVLNVYAQAHHIDYFNREGLVKNEQILSLFA
HQLREIQHDLAGFEQVKKFVLLIKPFTMEAGELTPTLKLRRKIIFSRYQKEIEQLYRE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaccttaaatgactatcatctgattacccgttttcgccaacaagtcagtgcc
cgtcctgagcagactgcgtttcgcgaatggtcgcccgtggcggaaaccgcgctgacctgg
cgcgagcttggcgagaaagtcgatgcgctgtccgacgtattattgcaggagcaggtgggc
gttcaggaacggatcgcgatttgcggcaataacgcgatggcatgggcgatggcggatctg
gcgatcctgcaactgcgtgcggttaccgtgccggtctatgccaccaatacgcctgctcaa
tccgcctatgtgctcaatgacgccgacatccgcattatgttcgtggtcggacagaagcaa
tatgacacggcggtggcgttgcgtgagctttgcccgcagctgaaacatattctggtgctg
gataacgatgtcgatttgcggggtgtgccgattgcccgccatgtgtctggcctcattcct
caggatgcggcgctggccgcggagcgtgaagtccgggtcaatgcctgcgatctgagtgat
ctgtttaccctgatctacacgtcgggcacaaccggagaggcgaaaggtgtgatgctggat
taccgcagtatggcgacgcaacttaagcaacatgaaaagcgactgagcattacggaccgt
gatatttccctttgcttcctgccgctggcgcacgtgtttgagcgcgcgtggagtttcttt
gtcatgcattgcggcgcacaaaatgttttcctgcgtgaaacggatcgggtgcgtgatgcc
ttgcaggccatcaaacccactgtgatgtgcgccgttccgcgcttctatgaaaaggtgttc
agcgccatccatgacaaagtcgcccgcgccggaacgatcaaaaaacgcctgttccactgg
gcggtcgcacagggaaaagaaaagtttttaaccgagcgccggggtgagcgttacccgttc
tggctggcccccgcccattttctggccgacaagctggtactgaaaaaattgcgtgattta
cttggcggtaatctgcgattcctgcccgctgccggtgcgagtctggatgataatgtcatc
ctgtttttcgagtctgtagggctgaaaatcaaatacggttatggcctgactgaaacctgc
gcgacggttacctgctgggaagaaaacgacttccgctttggttctgtcggcaccgccttg
cctgaaatcgaagtgcgcatcggggacgaaaacgaaattcaggttcgtggcccgacatta
ctgcgcggctacttcaataagcccgaagaaacggcggccagcttcactgctgacggttgg
tttaaaaccggtgacgccgggaaaatggacgcgcagggaaatgtgtttatcaccgagcgg
ctgaaggatctgatgaaaacctcgggcggaaaatacatcgccccgcagcgtatcgaaggc
acgctggtgcaggaccgctatatcgagcaggccgcggtgattgccgatgaacggcatttt
gtctcagcactgatcgttccggattttgatgtgctgaatgtttatgcccaggcgcaccat
atcgattacttcaaccgtgaagggctggtgaaaaacgaacagatcctttcactgtttgct
catcagttacgtgagatccaacatgatctggcgggctttgagcaggtcaaaaagtttgtc
ttattgatcaaacctttcacgatggaagcgggggaactgaccccgaccctgaagttgcgc
cgcaagatcatcttcagccgctaccagaaagaaatcgaacagttgtaccgcgagtaa
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